Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01497 ATGGATAAACCTCACGAGACAACAAGTGATAAGGCTGATCAGGAATGCGTAAAACAGGCTGGTGTGGCTCCAGTTCTCCATGAATCGATAGAGATGCAGGGCGATGAAGTGTCGCCGGCGACGCCTTGGATCGGGTGGCGACGACTCCGGCGGCAAGCCACATCACCGGCGACGACTGGGTTCGACATGAATGGCTTGGATGCGCTGCAGAGGTTGAATGCGTCTTCCTCTTGCACGAAGGAGGAGGGGAAAAGTGGTGGTGGTCTGCCCCGAAGGATGATGGCTTTTTCGGCGCAAGTACCGACAACACCGTGGACAGCAGTGTGGTGGCTGAGGCGGCAACGCCCATGCGGTGGCAACCCGTATCGCGGGCAACACCTCCGATCGGGTTCGTGTGTTGGTGATCTGGTAGATAGAGAAGTAAAGCTGGAGAAGACGTGGAACGGAGATCCTATTGAACCAGCAAAAAACTCAAAATCCTATAATCTAAATGCCTTTGACATCAGCTCCTATTCCTCTGGTTTTGACTTGTCTGGTTTGTTTGAGGAGACTGATCGAAAGAAAGAAGCACGATTTACATCTCACAAGCTAGTCCCCATTATCATCTTCAAGTTGGAAGAAATTTGCAAGCGCCTTCGATTGAAGCTCAAGAATAAAGATGGAGGTTTGTTCAAGTTGGAAGGTTCTAAGGTAGGCAGAAAAGGGCCTTTGGGTATTGATGCTAAGATTTTTGAGATCACCCCAGTTTTCCATCTTGTGGAGTTAAAAAAGTCTAGTGGAGATACATTGGAGTACCAGAAACTTTTGAATCAGGAAGTGAGGTCTGCACTTAAGGACGTTGTTTGGAACTGGCAAGGAGAAGCTGGATTGTCGACGAACCACGAAGCTGGATTGTTGAAACTGGTTGTTCAACCCTAA 918 0.4891 MDKPHETTSDKADQECVKQAGVAPVLHESIEMQGDEVSPATPWIGWRRLRRQATSPATTGFDMNGLDALQRLNASSSCTKEEGKSGGGLPRRMMAFSAQVPTTPWTAVWWLRRQRPCGGNPYRGQHLRSGSCVGDLVDREVKLEKTWNGDPIEPAKNSKSYNLNAFDISSYSSGFDLSGLFEETDRKKEARFTSHKLVPIIIFKLEEICKRLRLKLKNKDGGLFKLEGSKVGRKGPLGIDAKIFEITPVFHLVELKKSSGDTLEYQKLLNQEVRSALKDVVWNWQGEAGLSTNHEAGLLKLVVQP 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01497 305 CDD CIPK_C 164 278 - -
Vimu2g01497 305 ProSiteProfiles NAF domain profile. 158 182 IPR018451 GO:0007165
Vimu2g01497 305 Pfam NAF domain 162 217 IPR004041 GO:0007165
Vimu2g01497 305 Gene3D Kinase associated domain 1, KA1 158 283 - -
Vimu2g01497 305 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 114 275 - -
Vimu2g01497 305 FunFam Non-specific serine/threonine protein kinase 158 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01497 Vimu-Chr2 10327587 10330175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01497 148 287 CBL-interacting serine-threonine protein kinases AT5G58380 56.738 2.52e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01497 K07198 - gmx:100815651 242.662