Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01492 ATGATAATGAGCAATGCTGCCGAGAAACTTATACCAGTTACATTGGAGCTTGGTGGAAAAGGTGCATTTATTGTTTGTGAAGATGTAGATGTGGATCATTGCCATAGTTTTAATTGGCTGATCTGCCGAATATGGGGTGCTCAAATTGCTGCCAGGGCTGTTCTTCAGTCAAGTGGGCAGAACTATGCTGGGGCTGAGCGACTTTATGTCCACAGTAACATATATGCATCCTTTGCCAGTAAAGTTACCAAAATTATAAAATCTATTACGGCTGGCCCACCACTTGCTGGAAAGTATGATATGCGAGCTTTATGTATGCATGCGCATTCTGAAAAGCTTCAAGGCCTTATAAATGATGCTTTAGACAAAGGAGCTGAAATTATTGCACGAGGATGTTTTGGACACATAGGTGAAGGTGCAGTTGATCAATATATTTCCCCCCTACGGTGA 450 0.42 MIMSNAAEKLIPVTLELGGKGAFIVCEDVDVDHCHSFNWLICRIWGAQIAARAVLQSSGQNYAGAERLYVHSNIYASFASKVTKIIKSITAGPPLAGKYDMRALCMHAHSEKLQGLINDALDKGAEIIARGCFGHIGEGAVDQYISPLR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01492 149 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 18 IPR016162 GO:0016491
Vimu2g01492 149 Coils Coil 148 149 - -
Vimu2g01492 149 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 2 147 - -
Vimu2g01492 149 Pfam Aldehyde dehydrogenase family 2 132 IPR015590 GO:0016491
Vimu2g01492 149 SUPERFAMILY ALDH-like 2 134 IPR016161 GO:0016491
Vimu2g01492 149 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 19 131 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01492 Vimu-Chr2 10256208 10259307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01492 1 147 Aldehyde Dehydrogenase Gene Family AT3G66658 63.946 3.68e-61 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01492 - - gmx:100797873 221.861