Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01434 ATGGGGAGTATAAATGCCCCAGTTGACGAGTCAATATTTGATGTCAAGAAGGAAATTGATGATTTATTGCCTGTTGAGGTCAAAGAGCAACGAGTGAGCAACCTGCTCCAGTCTGTGATGGTAGTAGGATGTTTAGCAGCAATGCCTTTCCTGAAAATGATTCCAACTTCTGTGCTATGGGGTTATTTTGCTTTCATGGCCATTGAAAACTTACCTGGCAACCAGTTCTGGGAACGGATTTTATTCATTTTAACTGCTCCAAGCAGAAGATACAAGTATGAATATGATGTTAAAAGTTTCCTATCTGTTTTCCTTCTTTTTGGGACAGTTAAAGTTGCATTCACTGACTTTACCTTGCTTTATCTTTCACACTGTGATACAAATGTAGAGTTCTGGAGGAGTGCCATGCATCTTATGTGGAAACCGTTCCATTCAAGACAGTTGCAGTGTTTACAGTCTTCCAGACTGCTTACTTGCTTGTTTGTTTCGGTATCACTTGGATTCCAACAGCTGGGGTTCTATTCCCATTGA 531 0.4049 MGSINAPVDESIFDVKKEIDDLLPVEVKEQRVSNLLQSVMVVGCLAAMPFLKMIPTSVLWGYFAFMAIENLPGNQFWERILFILTAPSRRYKYEYDVKSFLSVFLLFGTVKVAFTDFTLLYLSHCDTNVEFWRSAMHLMWKPFHSRQLQCLQSSRLLTCLFVSVSLGFQQLGFYSH 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01434 176 PANTHER ANION EXCHANGE PROTEIN 25 127 IPR003020 GO:0005452|GO:0006820|GO:0016020
Vimu2g01434 176 Pfam HCO3- transporter family 25 94 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01434 Vimu-Chr2 9738735 9739265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01434 2 125 Antiporters AT2G47160 68.548 2.52e-51 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01434 K24194 - gmx:100795777 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01434 2 9738735 9739265 Vimu2g01434 2 9738735 9739265 ECH