Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01414 ATGTTGAAGATGGAGGGTGGTTCAGCGTGGTTACTGTATGCTGGTGGTGCTCTTTTAGTCCTAAGGTTCATCCTCAAGAATGTAAACTGGTTGCTCTATGAATACAAACTGGGTGGGAAGCAATACTTTCTTCCTCCTGGTGATATGGGATGGCCCATAATCGGCAACATGTGGTCTTTCCTCTCTGCTTTCAAAACCACTAATCCTGATACCTTCATAGACTCCTTTTATTCCAAGTATGGAAAAACTGGGATATACAAGGTATTGATGTTTGGAAATCCAAGTGTAATCGTGACAACCCCAGAAACATGCAAAAAGGTGTTGACAGATGATGAACACTTTGAACCTGGATGGCCTCGTTCCACAGTAGAACTCATGGGTGAAAAATCTTTCATTTCAATACCATATGATGAACACAGACGTCTTAGACGCCTAACATCTGCTTCCATCAATGGTTATGAAGCACTCTCTGTTTACATTACATATATTGAAGAAGTTGTCAAAAGTTCCCTGGAGAAATGGTCTACTATGGGAAACATTGAGTTTTTGACTGAGATGCGCAAGCTTACTTTCAAAGTCATTATACACATTTTTCTTGGCGCTGAAAGTGATGTGGTTATGGAAAATTTGGAAAAGGAATACACCAAACTCAACTATGGAGTTAGAGCCATGAGAATTAACATTCCTGGATTTGCCTTCCATACAGCTCTCAAGGCAAGGAAAAATCTTGTGGCCATATTTCAATCTGTTGTGGATAAACGAAGGATGGAAAGGAGGGAAAATTTAGCCAGCAAAAAGGCGAAAGATATGATGGATGCTCTGATAGATGCTGAGGATGAAAATGGAAAAAAATTGGGTGACCAAGATGTGATTGATATCATGTTGATGTACTTGAATGCTGGTCATGAGTCCTCTGGACATATTACTACATGGGCAACCTATTTCCTCCAAAGGCACCCAGAATATTTCAAGAAGGCTAAGGAAGAACAAGAAGAAATGTTAAGGAAAAGGCCTCCAACACAGAAAGGGTTGACACTTGCAGAAGTTAGGAAGATGGAATATCTATCCAAGGTGGTTGATGAAACAATGCGGATAATCACATTCTCACTAATGGTCTTTCGGGAGACAAAAAAAGATGTCAATATCAATGGTTACCTGATTCCAAAAGGTTGGAAAGTAATGACGTGGTTCAGGTCTGTTCACCTTGATCCCACTATATATCCTAATCCAAAGGAGTTTGATCCTGAGAGATTTAATGAGGTGCGCAAGGCTGGAGAATTTCTTCCCTTTGGTGCAGGAACTAGACTGTGTCCTGGGAATGATCTTGCCAAGCTGGAAATCTCAGTCTTCCTTCATCATTTTCTGCTGGGCTACGAGCTTGAACAGATTAATCCACTGGCTCCCATGAAATTCCTTCCTCACACAAGGCCTGTTGACAACTGCTTGGCAAGGATTAAGAAAGTGAAGTAA 1470 0.4095 MLKMEGGSAWLLYAGGALLVLRFILKNVNWLLYEYKLGGKQYFLPPGDMGWPIIGNMWSFLSAFKTTNPDTFIDSFYSKYGKTGIYKVLMFGNPSVIVTTPETCKKVLTDDEHFEPGWPRSTVELMGEKSFISIPYDEHRRLRRLTSASINGYEALSVYITYIEEVVKSSLEKWSTMGNIEFLTEMRKLTFKVIIHIFLGAESDVVMENLEKEYTKLNYGVRAMRINIPGFAFHTALKARKNLVAIFQSVVDKRRMERRENLASKKAKDMMDALIDAEDENGKKLGDQDVIDIMLMYLNAGHESSGHITTWATYFLQRHPEYFKKAKEEQEEMLRKRPPTQKGLTLAEVRKMEYLSKVVDETMRIITFSLMVFRETKKDVNINGYLIPKGWKVMTWFRSVHLDPTIYPNPKEFDPERFNEVRKAGEFLPFGAGTRLCPGNDLAKLEISVFLHHFLLGYELEQINPLAPMKFLPHTRPVDNCLARIKKVK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01414 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Vimu2g01414 489 SUPERFAMILY Cytochrome P450 42 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01414 489 PRINTS B-class P450 signature 437 448 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01414 489 PRINTS B-class P450 signature 134 145 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01414 489 PRINTS B-class P450 signature 374 401 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01414 489 PRINTS B-class P450 signature 428 437 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01414 489 PRINTS B-class P450 signature 402 417 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01414 489 Pfam Cytochrome P450 45 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01414 489 CDD CYP90-like 77 487 - -
Vimu2g01414 489 Gene3D Cytochrome P450 37 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01414 489 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01414 489 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01414 489 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01414 489 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g01414 489 PANTHER CYTOCHROME P450 26 41 474 - -
Vimu2g01414 489 FunFam Ent-kaurenoic acid oxidase 35 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01414 Vimu-Chr2 9595275 9599064 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01414 17 488 Cytochrome P450 AT2G32440 64.482 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01414 K04123 - gmx:100781238 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01414 2 9595275 9599064 Vimu2g01414 2 9595275 9599064 ECH