Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01354 ATGACAGAGACCTGCTCTTCATTGACATTCATGATGCTGTATGATCCAGTGGATGAAAAGTCAACCATGTCCCTTCAAACATTTTGTGTAGCAGGATCCAAATTTATTCAGCAGCCACAAGGTGTCTGTGTTGGCAAGCCTGCACCCCATGTAGAACTGAAGATAAGTGCAGATGCTTCTGGTCTAATTGGAAGAATTCTAACAAGAGGACCACATATAATGCTTAGGTATTGGGAAACTCACACAAATCCAGTAAGCCCGAACAATGAAGCCTGGCTTGACACAGGTGATATTGGATCAATTGATCATTATGGTAACTTGTGGCTTCTTGGTCGAACAAATGGTCGAATCAAGAGTGGTGGGGAGAACATTTACCCTGAAGAGGTAATAGAAGTGTCACCTAACTTTGTTACCTTATCATAA 423 0.4184 MTETCSSLTFMMLYDPVDEKSTMSLQTFCVAGSKFIQQPQGVCVGKPAPHVELKISADASGLIGRILTRGPHIMLRYWETHTNPVSPNNEAWLDTGDIGSIDHYGNLWLLGRTNGRIKSGGENIYPEEVIEVSPNFVTLS 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01354 140 Gene3D - 1 121 IPR042099 -
Vimu2g01354 140 PANTHER ACYL-COA SYNTHETASE 1 132 - -
Vimu2g01354 140 Pfam AMP-binding enzyme 1 119 IPR000873 -
Vimu2g01354 140 SUPERFAMILY Acetyl-CoA synthetase-like 1 129 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01354 45 129 Monolignol Biosynthesis Gene Families AT4G05160 30.435 2.50e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01354 K14760 - gmx:100787691 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01354 2 9134395 9134817 Vimu2g01354 2 9134395 9134817 ECH