Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01335 ATGAATTCCCTTGGTTTATGCTGTGTTCTGGTCGTGCTTGGAACACTACACTGCTTCTCCTGTCAACAACTAGATCCATTGTTTTACAATACCACATGCCCAAATGTTTCTTCAATTGTAACAGATGTGCTCTCAAATGTTTCCCAATCTGATCCTCGTATGCTTGCAAGTCTCATCAGACTCCACTTTCACGACTGTTTTGTTCAGGGGTGTGATGCATCTGTTCTGTTGAACGACACTGATACCATTGTGAGTGAGCAAACTGCAGCGCCAAATAACAACAGCTTAAGAGGTTTGGATGTTGTGAATCAGATCAAGACAGCCGTAGAAAATGCTTGTCCTGGGGTTGTCTCCTGTGCTGATATTCTTGCTCTTGCAGCCGAGACATCTTCTCAACTGGCTGGTGGTCCTTCTTGGGAAGTTCTACTGGGAAGAAGGGATAGTTTGACAGCAAATCGAACCCTTGCTAATCTAAACCTTCCTGGTCCTAATTTTACACTTGATCAACTTATTTCCTCGTTTGCTAATCAGAACCTCAGTGTCACTGATCTAGTTGCACTTTCAGGTGCCCATACGATTGGAAAGGCTCAATGCAGATTTTTTGTGAATAGATTATACAATTTTAGCAGTGGGAACCCAGATCCTATTCTCAACACCACTCTCTTAGAATCATTGCGAGCAATATGTCCCAATGGTGGAGTTGGAACAAATCTCACCAACTTGGACATAACTACTCCTGAAACATTCGATTCTGAGTACTATTCCAATCTTCAACTTCAAAATGGCCTGCTTCGGAGTGATCAAGAGCTGTTTAGCACAACTGATGCAGAAACTGTTCCTATTGTCAACAGTTACATTAACAATCAAACTCTTTTCTTTGAAGACTTCATAGCGTCAATGATAAGAATGGCCAACATTGGAGTGTTGACAGGATCAGAGGGAGAAATTCGACAACAATGCAACTTTGTGAATACATTTGATATCTTTAGCATCATAAATCGTCAGAAGATGGAATTGTCATAA 1023 0.4125 MNSLGLCCVLVVLGTLHCFSCQQLDPLFYNTTCPNVSSIVTDVLSNVSQSDPRMLASLIRLHFHDCFVQGCDASVLLNDTDTIVSEQTAAPNNNSLRGLDVVNQIKTAVENACPGVVSCADILALAAETSSQLAGGPSWEVLLGRRDSLTANRTLANLNLPGPNFTLDQLISSFANQNLSVTDLVALSGAHTIGKAQCRFFVNRLYNFSSGNPDPILNTTLLESLRAICPNGGVGTNLTNLDITTPETFDSEYYSNLQLQNGLLRSDQELFSTTDAETVPIVNSYINNQTLFFEDFIASMIRMANIGVLTGSEGEIRQQCNFVNTFDIFSIINRQKMELS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01335 340 Pfam Peroxidase 42 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g01335 340 ProSiteProfiles Plant heme peroxidase family profile. 23 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g01335 340 Gene3D - 28 324 - -
Vimu2g01335 340 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g01335 340 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g01335 340 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g01335 340 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g01335 340 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g01335 340 Gene3D Peroxidase, domain 2 161 303 - -
Vimu2g01335 340 FunFam Peroxidase 27 196 - -
Vimu2g01335 340 SUPERFAMILY Heme-dependent peroxidases 23 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu2g01335 340 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Vimu2g01335 340 CDD secretory_peroxidase 23 323 IPR033905 GO:0004601|GO:0042744
Vimu2g01335 340 PANTHER PEROXIDASE 72-RELATED 21 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01335 340 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01335 340 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01335 340 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01335 340 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01335 340 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01335 340 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01335 340 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01335 340 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01335 340 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01335 340 FunFam Peroxidase 161 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01335 Vimu-Chr2 8952213 8953540 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01335 9 324 Peroxidase AT5G06730 59.306 4.48e-133 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01335 K00430 - gmx:100814455 506.908