Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01334 ATGAAATACAATAAGAAATGGGAAATTGACCATCTTCTTAGAGAGACATCACATGATCAAATAGCATATAAATGGTTCATTTCAGGTGCTCATACATTTGGCAGAGCTCACTGTTCTTTCATTCTTGACCGATTGTACAACTTCAGTGGTACTGGAAGACCCGACCCAAATCTGGACACAACTTACTTACAACAATTACGGTCACAGTGCCCCCAAGGTGGACCTGACAACCTTGTAAATTTTGATCCAACTACTCCTGATACAATCGACAAGGTCTACTACTCCAATCTTTTGGTTAAAAAGGGTTTGCTTCAGAGTGATCAGGCGTTGTTCTCAACTCCCGGCGCTGATACCATTCCCATTGTCACCAGGTTCAATAGCGATCAAAAGGTTTTCTTTGACGCATTTGAGGCTTCGATGATTAAGATGGGTAACATTCGTGTGCTCACTGGGAAGCAAGGAGAAATCAGAAAGCACTGTAATTTTGTTAACAAGAAATCTGTTGAAATTGATACTGTGGTCTCTGAGGAATCTTCTGCAGAGGGTTTGGTTAGCTCTTTCTAA 564 0.4113 MKYNKKWEIDHLLRETSHDQIAYKWFISGAHTFGRAHCSFILDRLYNFSGTGRPDPNLDTTYLQQLRSQCPQGGPDNLVNFDPTTPDTIDKVYYSNLLVKKGLLQSDQALFSTPGADTIPIVTRFNSDQKVFFDAFEASMIKMGNIRVLTGKQGEIRKHCNFVNKKSVEIDTVVSEESSAEGLVSSF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01334 187 PRINTS Plant peroxidase signature 96 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01334 187 PRINTS Plant peroxidase signature 138 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01334 187 PRINTS Plant peroxidase signature 22 34 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01334 187 PRINTS Plant peroxidase signature 80 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01334 187 PRINTS Haem peroxidase superfamily signature 82 97 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g01334 187 PRINTS Haem peroxidase superfamily signature 23 38 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g01334 187 Gene3D Peroxidase, domain 2 27 143 - -
Vimu2g01334 187 ProSiteProfiles Plant heme peroxidase family profile. 13 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g01334 187 PANTHER PEROXIDASE 72-RELATED 27 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01334 187 Pfam Peroxidase 27 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g01334 187 SUPERFAMILY Heme-dependent peroxidases 27 164 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu2g01334 187 FunFam Peroxidase 15 143 - -
Vimu2g01334 187 Gene3D - 144 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01334 Vimu-Chr2 8938380 8939203 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01334 27 166 Peroxidase AT2G38390 60.284 3.41e-57 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01334 K00430 - gmx:547499 280.411