Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01331 ATGGGTTTCATGCGTGTAGTACTAGTGGCAGTGTTGTGTTCATTTGCTTTGCATGCAGGGTTTTCTGTCACTAATGCTCAGCTTAGTCCTACGTTCTACAGAACAACATGTCCAAATCTATTCCATATTGTGTTTCAAGTCATCTTTCAAGCTTCCACCACCGATCCCCGAATTGGGGCCAGCCTTCTCAGGCTTCATTTTCATGATTGCTTTGTTCAAGATATAGATATTCTGTCAGAAAAGATAAATCTCAATAATGACAATAAAAAGCTATGGTCAATATCTAAGGTTAAGGGTTGTGATGCATCAGTTTTGTTGAACAACACTGATACCATACAAAGCGAGCAAGATGCAGCTCCAAATATCAATTCATTAAGGGGTTTGGATGTGGTCAATAACATAAAGACAGCAGTGGAAGATAGTTGTCCAGAGACAGTTTCTTGTGCTGATATTCTTGCCATTGCAGCTGAAGTAGGTTCTGTTCTGGGAGGAGGTCCAGGATGGCCAGTTCTATTAGGAAGAAGAGATAGTTTAACAGCAAACAGAACCCTTGCAAATCAAAACCTTCCTGCTCCTTTCTTCAACCTCACTCAACTTAAAGCAGCATTTGCTGTTCAAGGTCTCAACACCACTGATTTAGTTGCACTCTCAGGTGGTCATACGTTTGGAAGAGCTCACTGCAGCACATTCAATAACCGATTATACAACTTCAACAACAGTGGAAACCCTGATCCAACTCTGAATACAACGTACTTAGCAACACTGCGTCTGATATGCCCCCAGAACGCAACTGGGAATAACCTTACCAATTTGGACCTGACCACACCTGATCAATTTGATAACAAATACTACTCCAATCTACAGCACCTCAATGGCTTACTTCAGAGCGACCAGGAACTCTTCTCTACTCCTGGTGCTGATACCATTCCCATTGTCAACAGTTTCAGCAGTGACCAAAATGCTTTCTTTGCCAACTTTGTAGCGTCAATGATAAAAATGGGAAATATTGGAGTGCTCACAGGAACTGATGGTGAAATTCGCAGCCAATGCAACTTTGTGAATGGAAACTCCTTTGGATTAGCTAGTATGGCGTCCAAAGATCCTAAGCAAAAGATGGTTTCTCAATGTTAA 1131 0.4164 MGFMRVVLVAVLCSFALHAGFSVTNAQLSPTFYRTTCPNLFHIVFQVIFQASTTDPRIGASLLRLHFHDCFVQDIDILSEKINLNNDNKKLWSISKVKGCDASVLLNNTDTIQSEQDAAPNINSLRGLDVVNNIKTAVEDSCPETVSCADILAIAAEVGSVLGGGPGWPVLLGRRDSLTANRTLANQNLPAPFFNLTQLKAAFAVQGLNTTDLVALSGGHTFGRAHCSTFNNRLYNFNNSGNPDPTLNTTYLATLRLICPQNATGNNLTNLDLTTPDQFDNKYYSNLQHLNGLLQSDQELFSTPGADTIPIVNSFSSDQNAFFANFVASMIKMGNIGVLTGTDGEIRSQCNFVNGNSFGLASMASKDPKQKMVSQC 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01331 376 ProSiteProfiles Plant heme peroxidase family profile. 27 354 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g01331 376 PANTHER PEROXIDASE 72-RELATED 25 353 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01331 376 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Vimu2g01331 376 Pfam Peroxidase 47 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g01331 376 FunFam Peroxidase 190 333 - -
Vimu2g01331 376 PRINTS Plant peroxidase signature 164 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01331 376 PRINTS Plant peroxidase signature 270 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01331 376 PRINTS Plant peroxidase signature 145 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01331 376 PRINTS Plant peroxidase signature 328 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01331 376 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01331 376 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01331 376 PRINTS Plant peroxidase signature 211 223 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01331 376 PRINTS Plant peroxidase signature 286 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g01331 376 CDD secretory_peroxidase 27 353 IPR033905 GO:0004601|GO:0042744
Vimu2g01331 376 Gene3D Peroxidase, domain 2 190 333 - -
Vimu2g01331 376 PRINTS Haem peroxidase superfamily signature 212 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g01331 376 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g01331 376 PRINTS Haem peroxidase superfamily signature 272 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g01331 376 ProSitePatterns Peroxidases proximal heme-ligand signature. 212 222 IPR019793 -
Vimu2g01331 376 Gene3D - 32 354 - -
Vimu2g01331 376 SUPERFAMILY Heme-dependent peroxidases 27 354 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01331 Vimu-Chr2 8918995 8922067 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01331 2 357 Peroxidase AT5G06730 54.494 3.19e-134 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01331 K00430 - vra:106774868 640.573