LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu2g01331	ATGGGTTTCATGCGTGTAGTACTAGTGGCAGTGTTGTGTTCATTTGCTTTGCATGCAGGGTTTTCTGTCACTAATGCTCAGCTTAGTCCTACGTTCTACAGAACAACATGTCCAAATCTATTCCATATTGTGTTTCAAGTCATCTTTCAAGCTTCCACCACCGATCCCCGAATTGGGGCCAGCCTTCTCAGGCTTCATTTTCATGATTGCTTTGTTCAAGATATAGATATTCTGTCAGAAAAGATAAATCTCAATAATGACAATAAAAAGCTATGGTCAATATCTAAGGTTAAGGGTTGTGATGCATCAGTTTTGTTGAACAACACTGATACCATACAAAGCGAGCAAGATGCAGCTCCAAATATCAATTCATTAAGGGGTTTGGATGTGGTCAATAACATAAAGACAGCAGTGGAAGATAGTTGTCCAGAGACAGTTTCTTGTGCTGATATTCTTGCCATTGCAGCTGAAGTAGGTTCTGTTCTGGGAGGAGGTCCAGGATGGCCAGTTCTATTAGGAAGAAGAGATAGTTTAACAGCAAACAGAACCCTTGCAAATCAAAACCTTCCTGCTCCTTTCTTCAACCTCACTCAACTTAAAGCAGCATTTGCTGTTCAAGGTCTCAACACCACTGATTTAGTTGCACTCTCAGGTGGTCATACGTTTGGAAGAGCTCACTGCAGCACATTCAATAACCGATTATACAACTTCAACAACAGTGGAAACCCTGATCCAACTCTGAATACAACGTACTTAGCAACACTGCGTCTGATATGCCCCCAGAACGCAACTGGGAATAACCTTACCAATTTGGACCTGACCACACCTGATCAATTTGATAACAAATACTACTCCAATCTACAGCACCTCAATGGCTTACTTCAGAGCGACCAGGAACTCTTCTCTACTCCTGGTGCTGATACCATTCCCATTGTCAACAGTTTCAGCAGTGACCAAAATGCTTTCTTTGCCAACTTTGTAGCGTCAATGATAAAAATGGGAAATATTGGAGTGCTCACAGGAACTGATGGTGAAATTCGCAGCCAATGCAACTTTGTGAATGGAAACTCCTTTGGATTAGCTAGTATGGCGTCCAAAGATCCTAAGCAAAAGATGGTTTCTCAATGTTAA	1131	0.4164	MGFMRVVLVAVLCSFALHAGFSVTNAQLSPTFYRTTCPNLFHIVFQVIFQASTTDPRIGASLLRLHFHDCFVQDIDILSEKINLNNDNKKLWSISKVKGCDASVLLNNTDTIQSEQDAAPNINSLRGLDVVNNIKTAVEDSCPETVSCADILAIAAEVGSVLGGGPGWPVLLGRRDSLTANRTLANQNLPAPFFNLTQLKAAFAVQGLNTTDLVALSGGHTFGRAHCSTFNNRLYNFNNSGNPDPTLNTTYLATLRLICPQNATGNNLTNLDLTTPDQFDNKYYSNLQHLNGLLQSDQELFSTPGADTIPIVNSFSSDQNAFFANFVASMIKMGNIGVLTGTDGEIRSQCNFVNGNSFGLASMASKDPKQKMVSQC	376

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu2g01331	376	ProSiteProfiles	Plant heme peroxidase family profile.	27	354	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Vimu2g01331	376	PANTHER	PEROXIDASE 72-RELATED	25	353	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vimu2g01331	376	ProSitePatterns	Peroxidases active site signature.	59	70	IPR019794	GO:0004601
	Vimu2g01331	376	Pfam	Peroxidase	47	317	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Vimu2g01331	376	FunFam	Peroxidase	190	333	-	-
	Vimu2g01331	376	PRINTS	Plant peroxidase signature	164	179	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vimu2g01331	376	PRINTS	Plant peroxidase signature	270	285	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vimu2g01331	376	PRINTS	Plant peroxidase signature	145	155	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vimu2g01331	376	PRINTS	Plant peroxidase signature	328	341	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Vimu2g01331	376	PRINTS	Plant peroxidase signature	37	56	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu2g01331	Vimu-Chr2	8918995	8922067	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu2g01331	2	357	Peroxidase	AT5G06730	54.494	3.19e-134	386

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu2g01331	K00430		-	vra:106774868	640.573

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