Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01288 ATGGCAGAAGAACTTAACCACTCTCTGGAATATACACCAACATGGATTGTTGCGGTTGTTTGCTGCATAATTGTTTTCATCTCTCTTTGTGTTGAACGCGCCCTTCACAAACTCGGAAACTACCTAAAGAGAAAAGGTCAGAATGCACTGTATGAAGTCTTGACAAAATTGGAAGAAGAATTGATGCTTTTAGGGTTCATTTCCCTTCTATTAACCGTCTTTCAAGGTTTAATAAGCGAAATTTGCATCTCACCAAACCTTGCAACCCAAATGCTTCCATGCAAAAGGCCTCATAGGTCTTCAGAAGGTTCAGCGCATTATCAGATATACTATGATGCTATAATAAACAGAAGGAGGCTTTTGTCTAGTGGTTCTGGTTCAGATCATTGTACACATAAGGGTAAGGTTCCACTGTTATCATTGGAATCTTTACATCAGCTTCACATTTTTATCTTTGTATTGGCCGTTGTACATGCAATATTCTGTGTCACAACAATGCTTCTTGCAGGTGCAAAGATGCAGGAATGGAAGGTATGGGAGGATTATTATCGAGATCACAGTGAAGCAATAGATAAACATGAGTTCTTCAAAGAAAAAAGTAGAGGACATTGGAGAAAAGCAGCTGTTATTAGTTGGCTGATATCATTCTTCAAGCAATTTCATGGCTCTGTTACAAAGTATGACTACTATGCACTTCGGTATGGATTTATCAAGAAACACCACTCAAATAACCTCAAGTATAATTTTCATAATTACATGCTGAGAACACTTGAAGTAGACTTCAAAAGAGTTGTTGGTATCAGCTGGTACCTGTGGGTCTTTGTTGTGCTGTTTTTGCTGTTGAACATTGAAGGATGGCACACTTATTTCTGGTTAGCCTTTTTACCCTTGATACTTCTACTTCTGGTGGGGGCAAAGTTGGAGCACATAATCGCTCGTTTGTATCAGGATTCAGTAGACATGTTTGGAAGAGATGATGACAAATTAGTGAAGCCATCAGATGAATATTTCTGGTTTACCAGCCCTCTCCTAGTCCTCCACTTACTTCACTTCATTTTGTTTCAAAACTCTTTTGAGATTGCATTTTTCTTCTGGATTTGGTGCACATATGGATTTGATTCATGCATTATGGAGAAAGTAGCCTACGTTATCCCAAGACTTATAATGGGAGGTAATGTGTCATGCAGTGTAATTGTTCAAGTGCTTTGCAGCTATAGCACCTTACCTTTGTACACTATTGTGACTCAGATGGGTAGCGAAATCAAGCCTCAGAAGAAGTTGCTTTCAAGTGACTCCCTCAATACACCGCATTCCAACTGTATGATCAAAGAATCAACCCAAACTGATGAACAAGCAATAATCATGGTGGAAGATGCAACATCTGCAATTGAGCTTGTTCCCTTGGAGAAACCTAATACATCCAACAGTTAA 1431 0.3899 MAEELNHSLEYTPTWIVAVVCCIIVFISLCVERALHKLGNYLKRKGQNALYEVLTKLEEELMLLGFISLLLTVFQGLISEICISPNLATQMLPCKRPHRSSEGSAHYQIYYDAIINRRRLLSSGSGSDHCTHKGKVPLLSLESLHQLHIFIFVLAVVHAIFCVTTMLLAGAKMQEWKVWEDYYRDHSEAIDKHEFFKEKSRGHWRKAAVISWLISFFKQFHGSVTKYDYYALRYGFIKKHHSNNLKYNFHNYMLRTLEVDFKRVVGISWYLWVFVVLFLLLNIEGWHTYFWLAFLPLILLLLVGAKLEHIIARLYQDSVDMFGRDDDKLVKPSDEYFWFTSPLLVLHLLHFILFQNSFEIAFFFWIWCTYGFDSCIMEKVAYVIPRLIMGGNVSCSVIVQVLCSYSTLPLYTIVTQMGSEIKPQKKLLSSDSLNTPHSNCMIKESTQTDEQAIIMVEDATSAIELVPLEKPNTSNS 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01288 476 PANTHER MLO-LIKE PROTEIN 1 7 439 IPR004326 GO:0006952|GO:0016020
Vimu2g01288 476 Pfam Mlo family 7 423 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01288 Vimu-Chr2 8608907 8613372 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01288 8 422 MLO family AT4G02600 54.670 4.68e-167 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01288 K08472 K01179 gmx:100792763 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01288 2 8608907 8613372 Vimu2g01288 2 8608907 8613372 ECH