Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu2g01245 | ATGATTCTGAAATTGGTAATCCATTTCATCATTTTTGTAACATGGTTTATACATACAGAGGTATCTGCACAAGATGATCTACAAGTAGTAGCAAAGCCTGGCTGTGATTCGCAGTGTGGAGATCTTGAAATTCCTTTTCCGTTTGGAATGAATGCTTCAGAATGCTACGCAGGGAAATGGTTTGAAATAGAATGCAGAAACACTTCAACATATCAAACACCTTACCTCAAGTCAATAGGACTGCAAGTCACGTCCATTGATGTCCAACAAGGCATGGTTACTATCAACAATCCCATTTACCGTAACAACTGCGGAACCAAAGATTCTACGCCGGTGAACCGGTCGCTGGAAGGAAGCCCTTTCGTGTATTCGCAACACAACAAATTTGTGGCCGCAGGTTGCAATATCATTGCATTGTTGAAGATAAATGGGTCAGAAGGTAGCGGTTGTGTGTCCATCTGCGACGAGGACTTGAAGGTGGATGATATTGGGAAAATGGAGCTTAAAAACAGTAATTGTAATGGGAAGTCCTGCTGTGAGAATTCCCTGCCAGCGTATCTTAAGGAATACAGCACTGAAGTAAAAGGTTTGAAGGAGAATGAAACGGATGGTGAGTGTAGTTACGCCATGGTTGTACAGCAAGAAGAACTGAACCCATACGAATGGGACTACGTCCCAGAGTATTCTTCTTATACTCCGAAAGGCTACTACTTTCCTGTGAATGGTGAGATGAAGGATTTGGATATGGTCCCTGTGGTGCTTGAATGGGAGATTCTCAACAACTTAAACCTTAAACTTCCTCCAGATGATCTCTCCCACTGTTTTGACACTAATATTACTTCTTCACTCCATAAACGTTCAGGTCAGAGATGTTCCTGCCCAGGCGGTTTCGGTAATCCCTATGTTGATGGAGGTTGTTCAGACTATGAGGACTACCGGAATTCGCCGAGTCACGTACCAATATCTGTCATAAAAGTTAATATGAATAAAGTTAAACTCTTCAGTTTAAAAGAATTGGAGAAGGCCACTGATAACTTTAATACAAATAGAGTACTTGGAAAAGGAGGTCAAGCTACTGTTTACAAAGGCATGTTGATCGATGGAACAATTATTGCAGTGAAAAAATTTAAGGTCCAAGGAAAGATTGAAGAATTTATCAATGAATTTGTCATTCTTTCACAAATTAACCATAGGAATGTGGTTAAGTTGTTAGGAAGTTGTTTGGAGACTAAAATTCCTTTGCTTGTTTATGAATTCATTCCTAATGGTAATCTTTTCGAGTACTTGCATTTACGAAATGAGGATATGCCATTGACATGGAACATGCGTTTGAGAATTGCCATTGAAGTTGCAGGAGCTTTATTTTACTTGCACTCTGCTGCTTCTCAACCTATTTATCATAAAGACATCAAGTCAACAAATATACTATTGGATGAAAAGTATAGGGCGAAAGTAGCAGACTTTGGTACATCAAGAATGATTTCCATTGATGTTACTCACCTTACTACAGTAGTTCAAGGAACATTTGGATACTTGGACCCTGAATTTTTTCAAACTAGTCAATTCACAGAAAAAAGTGATGTTTACAGTTTTGGAGTAGTTCTTGTTGAACTTTTAACAGGACAAAAGCCAATAACCCTCCTAAGTCAAGAGGAAGCTAAAAGTTTAGCTTCATATTTCATCATGTGTGTAGAGGAAAATTGTGTGTTTGATATTATTGATGAAAGAGTGATGAAGGAAGGGGAGAAATGTTATATCATGAAAGTTATCAATCTTGCAAGTCGATGTTTAGAGCTGAATGGAAAAAGGCGACCAACTATGAGGGAAATCACATTGGAATTAGAAGCTATTCGAAAATTGGAAAATGAGTCTAATGCACAAGAAGGGAAAGATGAGTTTGTTAGAAGTGAAGACTATAAATCTTGGGATGATAATTCTATTAACTCAGAAATAATGTCAACTATTGATCTAAGTAGCAGAATGACAATCTTGAAAGATGTTGATATTGTTACCATATGCTCTGAAGATCTTTCCGAGAAGCTGGGATATGAAGTGACCAAAGCAAAAGTATCTGCACGACATTACCTACAAGTAGCAAAGCCTGGCTGTGATTCGCAGTGTGGAGATCATGAAATTCCCTTTCCGTTTGGAATGAATGCTTCAGAATGCTACGCAGGGGCATGGTTTGAAATAGAATGCAAAAACACTTCCACATATCAAACACCTTACCTCAAGTTAATAGGAGTGCAGGTGACATTAATTGATGTCCAACAAGGCACGGTTACTATCAACAATCCCATTTACCGTCATAACTGCGGAACCAAATATTCTAGGCCAGTGTACCAGTCGCTGGAAGGAAGCCCTTACGTGTATTCGCAGGAACACAACAAATTTGTGGCCGTAGGTTGCAATATAATTACTTTTTTTCAGGTGAAATGGTCAGAAAGCAGTAGTTGTGCGTCCATCTGCGACGAGGACTTCAAGGTGGATGATATCAGGAAAATGAATCTTGGAAACAGTGATTGTAATGGGAAGTCCTGCTGTCAGAATTCCCTGCCAGCGTATCTTCAGGAATACATCACTGAAGTAAAAGGTTTGAAGGAGAATGAAACAGATCATGAGTGCAGTTACGCCATGGTTGTAAAGGAAAAACTGAACCACTACGAAGGGGAGGACGTCCCACACTCTCCTTATTATTATTATAAAGGTTACTTTCCTGTGAATGGTGAGATGAAGGATTTGGATGTGGTCCCTGTGGTGCTTGAATGGGAGATTCCCAACAACTTAAACCTTAAACTTCCTCCAGATTATCTCTCCCACTGTTTTGACACTAATATTACTTCTTCACTTGGTTCGGGCAAGAGATGTTCCTGCATATATTATTACGGTTTCGTTAATGTGGATAAAGTTAGACTCTTCAGCTTAAAAGAATTGGAGCAGGCCACTGATAACTTTAATACAAATAGAGTACTTGGAAAAGGAGGTCAAGCTACTGTTTACAAAGGCATGTTGATAGATGGAACAATTATTGTAGTGAAAAAATTTAAGGTCCAAGGAAAGATTGAAGAATTTATCAATGAATTTGTTATTCTTTCACAAATTAACCATAGGAACGTGGTTAAGTTGTTAGGAAGTTGTTTGGAGACTAAAATTCCTTTGCTTGTTTATGAATTCATTCCTAATGGTAATCTTTTTGAGTACTTGCATCAACAAAATGAGGATATGCCATTGACATGGGAGATGCATTTGAGAATTGCCATTGAAGTTTCAGGAGCTTTATTTTACTTGCACTCTGCCGCTTCTCAACCTATTTATCATAAAGACATCAAGTCAACAAATATATTGTTGGATGAAAAGTATAGGGCAAAGGTTGCAGACTTTGGAACATCAAGAATGATTTCCATTGATGTTACTCACCTTACTACAGTAGTTCAAGGAACATTTGGATACTTGGACCCTGAATTTTTTCAAACTAGTCAATTCACAGAAAAAAGTGATGTCTATAGTTTTGGAGTAGTTCTTGTTGAACTTTTAACAGGACAAAAGCCAATAACCCTTTTAAGTCAAGAGGAAGCCAAAAGTTTAGCTTCATATTTCATCATGTGTGTGGAGGAAAATTCTGTGTTTAATATTATTGATGAAAGAGTGATGAAGGAAGGGGAGAAATGTCATATCATGAAAGTTGTCAATCTTGCAAGTCAATGTTTAGAGTTGAACGGAAAGAGGAGACCAACTATGAGGGAAATCACATTGGAATTAGAAGATATTCGAAAGTTGAAAAAAGAGTCCAATGCACAAGAAGGACATGATGACTTTGTTAGAAGTGAAGACTATCAATCTTTGGATGATAATTCTTTTATCTCAGAAATAATGTCAACTTTTGATTTAAGTAGCAGAACAACAATCTTGAAAGATGTTCATATTGTTACCATGTGA | 3936 | 0.3788 | MILKLVIHFIIFVTWFIHTEVSAQDDLQVVAKPGCDSQCGDLEIPFPFGMNASECYAGKWFEIECRNTSTYQTPYLKSIGLQVTSIDVQQGMVTINNPIYRNNCGTKDSTPVNRSLEGSPFVYSQHNKFVAAGCNIIALLKINGSEGSGCVSICDEDLKVDDIGKMELKNSNCNGKSCCENSLPAYLKEYSTEVKGLKENETDGECSYAMVVQQEELNPYEWDYVPEYSSYTPKGYYFPVNGEMKDLDMVPVVLEWEILNNLNLKLPPDDLSHCFDTNITSSLHKRSGQRCSCPGGFGNPYVDGGCSDYEDYRNSPSHVPISVIKVNMNKVKLFSLKELEKATDNFNTNRVLGKGGQATVYKGMLIDGTIIAVKKFKVQGKIEEFINEFVILSQINHRNVVKLLGSCLETKIPLLVYEFIPNGNLFEYLHLRNEDMPLTWNMRLRIAIEVAGALFYLHSAASQPIYHKDIKSTNILLDEKYRAKVADFGTSRMISIDVTHLTTVVQGTFGYLDPEFFQTSQFTEKSDVYSFGVVLVELLTGQKPITLLSQEEAKSLASYFIMCVEENCVFDIIDERVMKEGEKCYIMKVINLASRCLELNGKRRPTMREITLELEAIRKLENESNAQEGKDEFVRSEDYKSWDDNSINSEIMSTIDLSSRMTILKDVDIVTICSEDLSEKLGYEVTKAKVSARHYLQVAKPGCDSQCGDHEIPFPFGMNASECYAGAWFEIECKNTSTYQTPYLKLIGVQVTLIDVQQGTVTINNPIYRHNCGTKYSRPVYQSLEGSPYVYSQEHNKFVAVGCNIITFFQVKWSESSSCASICDEDFKVDDIRKMNLGNSDCNGKSCCQNSLPAYLQEYITEVKGLKENETDHECSYAMVVKEKLNHYEGEDVPHSPYYYYKGYFPVNGEMKDLDVVPVVLEWEIPNNLNLKLPPDYLSHCFDTNITSSLGSGKRCSCIYYYGFVNVDKVRLFSLKELEQATDNFNTNRVLGKGGQATVYKGMLIDGTIIVVKKFKVQGKIEEFINEFVILSQINHRNVVKLLGSCLETKIPLLVYEFIPNGNLFEYLHQQNEDMPLTWEMHLRIAIEVSGALFYLHSAASQPIYHKDIKSTNILLDEKYRAKVADFGTSRMISIDVTHLTTVVQGTFGYLDPEFFQTSQFTEKSDVYSFGVVLVELLTGQKPITLLSQEEAKSLASYFIMCVEENSVFNIIDERVMKEGEKCHIMKVVNLASQCLELNGKRRPTMREITLELEDIRKLKKESNAQEGHDDFVRSEDYQSLDDNSFISEIMSTFDLSSRTTILKDVHIVTM | 1311 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu2g01245 | 1311 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 25 | 625 | IPR045274 | GO:0007166 | |
Vimu2g01245 | 1311 | Coils | Coil | 1246 | 1266 | - | - | |
Vimu2g01245 | 1311 | SUPERFAMILY | Protein kinase-like (PK-like) | 320 | 614 | IPR011009 | - | |
Vimu2g01245 | 1311 | ProSiteProfiles | Protein kinase domain profile. | 346 | 617 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu2g01245 | 1311 | Gene3D | Transferase(Phosphotransferase) domain 1 | 420 | 642 | - | - | |
Vimu2g01245 | 1311 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1059 | 1281 | - | - | |
Vimu2g01245 | 1311 | FunFam | Wall-associated receptor kinase 2 | 420 | 636 | - | - | |
Vimu2g01245 | 1311 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 465 | 477 | IPR008271 | GO:0004672|GO:0006468 | |
Vimu2g01245 | 1311 | Pfam | Protein tyrosine and serine/threonine kinase | 348 | 613 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu2g01245 | 1311 | Pfam | Protein tyrosine and serine/threonine kinase | 987 | 1252 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu2g01245 | 1311 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1104 | 1116 | IPR008271 | GO:0004672|GO:0006468 | |
Vimu2g01245 | 1311 | SUPERFAMILY | Protein kinase-like (PK-like) | 966 | 1253 | IPR011009 | - | |
Vimu2g01245 | 1311 | SMART | serkin_6 | 346 | 617 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu2g01245 | 1311 | SMART | serkin_6 | 985 | 1260 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu2g01245 | 1311 | FunFam | probable LRR receptor-like serine/threonine-protein kinase At1g53430 | 322 | 419 | - | - | |
Vimu2g01245 | 1311 | ProSiteProfiles | Protein kinase domain profile. | 985 | 1256 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu2g01245 | 1311 | Pfam | Wall-associated receptor kinase galacturonan-binding | 703 | 764 | IPR025287 | GO:0030247 | |
Vimu2g01245 | 1311 | Pfam | Wall-associated receptor kinase galacturonan-binding | 35 | 96 | IPR025287 | GO:0030247 | |
Vimu2g01245 | 1311 | Gene3D | Phosphorylase Kinase; domain 1 | 963 | 1058 | - | - | |
Vimu2g01245 | 1311 | Gene3D | Phosphorylase Kinase; domain 1 | 321 | 419 | - | - | |
Vimu2g01245 | 1311 | FunFam | Wall-associated receptor kinase 2 | 1059 | 1275 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu2g01245 | Vimu-Chr2 | 8298229 | 8308510 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu2g01245 | 703 | 883 | Receptor kinase-like Gene Family | AT1G69730 | 29.596 | 1.05e-11 | 67.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Vimu2g01245 | PK_Tyr_Ser-Thr | 3e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu2g01245 | - | - | vra:106774873 | 1192.95 |