Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01228 ATGCTTAAGCAAGCAAGGAATCTGAAGTGTGACGTGGACAGTGAACAGTTCAAAGATGCCTTACGTTACGAGTGGATGCCCCGTTTGATAGAGCGGATTCAACCGTCGTCGGAAACTCACGACCCGCCCCATGTGTCCCCCTCCGAACTTTACCCGAATCCAACTCCTTCGCTCCATCACCAAAATGGGTTACACGATTCGTGTTCAGGTTCCAATGCCTTGGACTTATCAAGTGCCAAGTTGGAGGTTCCTTTAGAGTCTGAAGATATGGGTCATAATAATGTTTCAGTTCCGAGAGTGTGTGAAAATATGAATGATCGAGACTTGGAACAGGGGAATATCATGCTACCTTTTGCTGGTGGGGACTCAATGGAGAGTTTATGGGATGATGAGAATATGTGGCTTATGCAACAACTTTGTGATGATCTGGAAATTAAAGACAATTTTCTTGCGTGA 456 0.4518 MLKQARNLKCDVDSEQFKDALRYEWMPRLIERIQPSSETHDPPHVSPSELYPNPTPSLHHQNGLHDSCSGSNALDLSSAKLEVPLESEDMGHNNVSVPRVCENMNDRDLEQGNIMLPFAGGDSMESLWDDENMWLMQQLCDDLEIKDNFLA 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01228 151 MobiDBLite consensus disorder prediction 36 67 - -
Vimu2g01228 151 MobiDBLite consensus disorder prediction 51 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01228 Vimu-Chr2 8179897 8180352 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01228 3 37 MYB Transcription Factor Family AT5G49620 65.714 4.00e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01228 K09422 - gmx:100797220 156.377