Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01171 ATGGCGTACGAACATCACAAACCCACGCAACCATGGATTAAGGACGCACTACCTGTATTGCTGGTTCTTCTGATAGCAGTGCATGTCCTCGCTATGCCACCCAGAAACAGACGCAAAGGAGAAAGGCTCACTGAAGGGCAAGGTCCGTCATTTGAAAATGAGGCAGAAGAAACACGCATCATTGTGGCATCTCATCTTGCTTCTTTTGTTGTGCTTCATTTTGTACGGTTCCGCTTGCTGGAATTACATAACCAGTCATTTTCTCTGCTGGTGCAAAACTTTAAAGACTGCTGCTTTGATGTATCAGGCCCAGTGAAAGCTCTGATACTAGATGGGTCAAAGGACCATCAAGCAAACAACCTCAATGGATACAAATTGATTTTTGTTACAATAGCATTGTTTAAGATCCAATTAAACCTGCCCCTGCGAAGGATGACGAAGGGGTCAAAGGCTTTGAGAACGCTGAGAGTCACAACTACCAGTCCTTGCTCTGCGTCCTGTGAATTTGGAAGAGTAAGGAAGCTACCTGGAAATTCATTTCTTACCCTGCAAAACACATTTCTTTATAACCACAAACCACCTTCTATTTTCGTCACCGTCGATCCATCACTCTCTTCCCACGAATTTTGGAAAATGAAAATGGGTAAAGGGGTCATTTTTACCGTTGCAATGGTGGACACCAGCATCATGTGGTCGGAGCAGACCGTGGCTGGGATCCAACCTCAGACCTTGTTTCCTGGTCTTCTGGCAGGGTCTTCAGGGTCGGAGACCAAATTTGAGGAGCGGAGTGACGGCAGTTCATCCATTGCGAATCTTTTAGCAGGGCTGGCATACTCAGTGGCACAGGGACTGGTGGCTGAGCTGAAAAGCAAAGAGGAATATGAGGCGTGTGATGTGAGAAATCCCATCAAAATGTACACAGAGGGTCTGCATTCTATTCCACTTGAGAGTAAAGGAATGAGGTACTTTGTGAGCACCCAACCTCAGAACTGCAAAAATGGTCTGAAGCTCCACATTGAGGTTCTGCCACAGGGCCAAGGCATCACAGACAATAAGTATTCCACCCTATCTGATTTTCAGGCTGCTGCACCCACTACTCCTTCTGCTTCAACCCGTTATGCTCAGAGCACTGTGTTATCGCTCTCTGTTTTATTTTTCCTCATCATATACCTTGCTTATTGA 1182 0.4594 MAYEHHKPTQPWIKDALPVLLVLLIAVHVLAMPPRNRRKGERLTEGQGPSFENEAEETRIIVASHLASFVVLHFVRFRLLELHNQSFSLLVQNFKDCCFDVSGPVKALILDGSKDHQANNLNGYKLIFVTIALFKIQLNLPLRRMTKGSKALRTLRVTTTSPCSASCEFGRVRKLPGNSFLTLQNTFLYNHKPPSIFVTVDPSLSSHEFWKMKMGKGVIFTVAMVDTSIMWSEQTVAGIQPQTLFPGLLAGSSGSETKFEERSDGSSSIANLLAGLAYSVAQGLVAELKSKEEYEACDVRNPIKMYTEGLHSIPLESKGMRYFVSTQPQNCKNGLKLHIEVLPQGQGITDNKYSTLSDFQAAAPTTPSASTRYAQSTVLSLSVLFFLIIYLAY 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01171 393 ProSiteProfiles Phytocyanin domain profile. 285 343 IPR003245 GO:0009055
Vimu2g01171 393 Pfam Plastocyanin-like domain 283 334 IPR003245 GO:0009055
Vimu2g01171 393 SUPERFAMILY Cupredoxins 284 342 IPR008972 -
Vimu2g01171 393 Gene3D - 276 341 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01171 Vimu-Chr2 7793531 7800988 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01171 290 344 Phytocyanin Superfamily AT4G30590 38.182 4.05e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01171 - - vun:114188592 310.457