Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu2g01157 | ATGAGTCAACTCGGCGTCGTGTTGCAGGAATCGCTACAGAGGGAGCCCAGAACCATTCTCGGCTTGTTGAGGGATCAGATGGACGGTGTAGAAGCTGGGGCTCGCAGGAGGAAGACCTTCAAGGAACGCTTCGGATTCATAGGCATCGGCTGCTGTGGGGCCACATGGGGATTCCGTTCTCACGCGTTAAGTTTCACCCAAGGAGAACAACAGCAGCAGGCCAACCACCAGGAAACGGATCCCGGTCAAGGGTCGGCTTTGGACTGTGTGGACCACGGTGCAGCGGGTTCGGGTATGAACTTGGCGGCGGCGCTTGCGGCTGAGCGGCAAATCCGTGGGCCGCAGGAGGAGGCGGGGAGAGCTCCGGGGACGCCGTGGAGGGTGTCGCTGATGAGGCTGCTGGAAGAGAGCGAAGGAGGGGAGTCCGCGGCGGTGGAGAAGGAAAAGGAGGAGGAGAAGGGTGATGTTGTGGGGAATGATTCGATGTGCTGCGTGTGCATGGGAAGGAAGAAAGGCGCGGCCTTCATCCCATGTGGTCACACTTTTTGCAGAGTGTGTTCCAGGGAACTGTGGCTGAATCGAGGGTCCTGTCCCCTCTGCAATCGCTCCATCCTCGAGATCCTCGATATTTTCTAG | 636 | 0.5896 | MSQLGVVLQESLQREPRTILGLLRDQMDGVEAGARRRKTFKERFGFIGIGCCGATWGFRSHALSFTQGEQQQQANHQETDPGQGSALDCVDHGAAGSGMNLAAALAAERQIRGPQEEAGRAPGTPWRVSLMRLLEESEGGESAAVEKEKEEEKGDVVGNDSMCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF | 211 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu2g01157 | 211 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 139 | 211 | IPR013083 | - | |
Vimu2g01157 | 211 | ProSiteProfiles | Zinc finger RING-type profile. | 163 | 201 | IPR001841 | - | |
Vimu2g01157 | 211 | Pfam | Zinc finger, C3HC4 type (RING finger) | 160 | 205 | - | - | |
Vimu2g01157 | 211 | SMART | ring_2 | 163 | 200 | IPR001841 | - | |
Vimu2g01157 | 211 | CDD | RING-HC | 163 | 200 | - | - | |
Vimu2g01157 | 211 | SUPERFAMILY | RING/U-box | 156 | 208 | - | - | |
Vimu2g01157 | 211 | PANTHER | OS01G0917900 PROTEIN | 7 | 211 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu2g01157 | Vimu-Chr2 | 7658244 | 7658879 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu2g01157 | 19 | 211 | C3H Transcription Factor Family | AT4G22250 | 56.566 | 4.64e-64 | 196 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu2g01157 | - | - | pvu:PHAVU_006G145000g | 302.367 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vimu2g01157 | 2 | 7658244 | 7658879 | Vimu2g01157 | 2 | 7658244 | 7658879 | ECH | |
Vimu7g02023 | 7 | 18128471 | 18129058 | Vimu2g01157 | 2 | 7658244 | 7658879 | PCT |