Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01074 ATGATCTCTTTAACGAAATGCTCAGCGTCATCGCTCACATGTTCTTCTTTCTCAACCAGAAAACTTCCCCTATCAAGGCCTCGACTTCTCACATTACCAACCATTAACAACGTTGAACAAAGCACAGGTCCCTCTCGGTTGTGCTCCCAGAAACCGCTCTACCTTTCATCCACAGAGAGCTTGGCATTGGTGAAGAGAAAGAGGGTGACGGAGTGCCAGGCCTATGAGGCTGACAGGTCACGCCCCATAGAGATTAACATTGAGCTGCCGGGTGAAGATGCTGCTCAGAGGGCGAAGATTGGGGTGTATTTTGCCACCTGGTGGGCTTTGAATGTGGTGTTCAACATCTACAATAAGAAGGTTTTGAATGCTTTTCCTTACCCCTGGCTCACCTCCACTCTCTCCCTCGCTGCCGGCTCCCTCATGATGTTAATCTCCTGGGCCACCAGAGTTGCTGAAGTCCCAAAAGTTAACTTTGATTTCTGGAAGGCCTTGTTTCCTGTAAGAATAATCTTTTTTTATTTCTTTCTATTTTTTTTTTTTCATTTTTGTCGTTTTCACAGAAATACTCATGATGTGATTGGCTAA 588 0.4541 MISLTKCSASSLTCSSFSTRKLPLSRPRLLTLPTINNVEQSTGPSRLCSQKPLYLSSTESLALVKRKRVTECQAYEADRSRPIEINIELPGEDAAQRAKIGVYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLMMLISWATRVAEVPKVNFDFWKALFPVRIIFFYFFLFFFFHFCRFHRNTHDVIG 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01074 195 Pfam Triose-phosphate Transporter family 99 173 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01074 Vimu-Chr2 7031579 7032166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01074 13 170 Antiporters AT1G61800 59.119 7.11e-59 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01074 K15283 K05350 gmx:100804205 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g01074 2 7031579 7032166 Vimu1g00472 1 2859344 2861461 ECH
Vimu2g01074 2 7031579 7032166 Vimu2g01074 2 7031579 7032166 ECH