Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g01048 ATGTGCAGTGAATGTGCAAAAGCTCTGAGAATTCAATCCAATAAATGCCCTATTTGCCGTCAGTCTATTGAGGAACTCATTGAGATCAAACTTTGGGAAACCGCATCGATCACTCTTGATCCGATTCCACCGTCATCGGATATTTCTTCTACCACCGTCTATCGAAGCTCTTCGCCGTCGCCGTACCTGTTCAGCAAGATGGAGCTTCATGTACTCATATTGGGCATTGACAAGGCTGGGAAAACGACTTTGCTGGAGAAGATGAAGTCAATGTACTCAAATATCGAAGGCATTCCTCCTGATCGAATTATTCCAACTGTCGGATTGAATATTGGTCGCATTGAAGTGACAAATAGTAAACTTGTATTTTGGGACTTGGGAGGTCAGCTAGCTGAGCTTGATGCCAGAAACACTGGAAGATCTGTGTTCTCTTATATTCTCTCTACCCTTTGTTGGGGAGGCTCTTCCTCTATTTATAGAGGAAATTCCTTGATAAGCAGCACTGTTCTTGGAGTCATCTTTGGCCGACAATTACTTGTTCACAACCAGGTTTGGGATCCCAGTTTATGTGTTTTCATTCAAGTACCGAGATATAGCTCGATGAAAACTGAGTCACCTACCCTGGCATCGGTCATGGGTCATGTCAAACTGTTGAAAGATACCTCGGCTACTAGCCAATGA 681 0.4376 MCSECAKALRIQSNKCPICRQSIEELIEIKLWETASITLDPIPPSSDISSTTVYRSSSPSPYLFSKMELHVLILGIDKAGKTTLLEKMKSMYSNIEGIPPDRIIPTVGLNIGRIEVTNSKLVFWDLGGQLAELDARNTGRSVFSYILSTLCWGGSSSIYRGNSLISSTVLGVIFGRQLLVHNQVWDPSLCVFIQVPRYSSMKTESPTLASVMGHVKLLKDTSATSQ 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g01048 226 Pfam ADP-ribosylation factor family 65 129 IPR006689 GO:0003924|GO:0005525
Vimu2g01048 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 31 IPR013083 -
Vimu2g01048 226 Gene3D - 57 145 IPR027417 -
Vimu2g01048 226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 132 IPR027417 -
Vimu2g01048 226 PANTHER ADP-RIBOSYLATION FACTOR-RELATED PROTEIN 1 62 129 IPR024156 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g01048 Vimu-Chr2 6767239 6771118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g01048 1 31 C3H Transcription Factor Family AT3G06140 80.645 1.79e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g01048 K07952 - gmx:100785527 135.191