Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu2g01027 | ATGACGTTAGTGTCATCCGTGGATGTGGACTTCTTTACAGAATATGGCGAGGGCAGCAGATACAGAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTCTGCTCTGCATATGATACACACACTGGAGAAAAGGTTGCAATAAAGAAAATCAATGACATATTTGAGCATGTTTCTGATGCTACTCGCATTCTTCGTGAGATTAAGCTTCTTAGACTTTTACGCCATCCAGATATTGATTATGCTCTAGCGGATCCATACTTTAAAGGCTTGGCCAAGGTTGAGAGAGAACCATCTGCTCAGCCTGTTACCAAGATGGAATTTGAGTTTGAGAGACGCCGGATAACCAAGGAAGATGTCCGTGAGCTTATATACAAAGAGATTCTGGAGTACCATCCAAAGATGTTGAAGGAATTTCTAGAGGGAGCAGAACCAACAGGTTTCATGTATCCAAGGCCATGTGTGTTGTATTCAGACAATAAAATACATAATACGTCGGACGTTGCAGATGATTTGTCCAAATGTTCCATCAAAGAAGTTGAGAAACAACCAGTAGATAGGAGTAATGTTATCCCTATGTCCCGGCTTCCTTTACCAGCACCTCAAAATATTCAAGGTGTAATGATTGAGTTTTACATGCATTTTATCCCTTCTCTGTTTCCTTTACTTCCTATTTATTGGACACACAGACATTACTGGTTTTATCTGACAAGAGTGTTGTGCCTTCATGATGCTTGTTTCATTTCAAGTCATCTTTCTTTTAACCAATAA | 774 | 0.3966 | MTLVSSVDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIDYALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYKEILEYHPKMLKEFLEGAEPTGFMYPRPCVLYSDNKIHNTSDVADDLSKCSIKEVEKQPVDRSNVIPMSRLPLPAPQNIQGVMIEFYMHFIPSLFPLLPIYWTHRHYWFYLTRVLCLHDACFISSHLSFNQ | 257 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu2g01027 | 257 | Gene3D | Phosphorylase Kinase; domain 1 | 7 | 82 | - | - | |
Vimu2g01027 | 257 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 20 | 86 | - | - | |
Vimu2g01027 | 257 | SUPERFAMILY | Protein kinase-like (PK-like) | 18 | 80 | IPR011009 | - | |
Vimu2g01027 | 257 | ProSitePatterns | Protein kinases ATP-binding region signature. | 27 | 51 | IPR017441 | GO:0005524 | |
Vimu2g01027 | 257 | Gene3D | Transferase(Phosphotransferase) domain 1 | 83 | 112 | - | - | |
Vimu2g01027 | 257 | ProSiteProfiles | Protein kinase domain profile. | 21 | 257 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu2g01027 | 257 | SMART | serkin_6 | 21 | 192 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu2g01027 | 257 | Pfam | Protein kinase domain | 21 | 80 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vimu2g01027 | 257 | Gene3D | Phosphorylase Kinase; domain 1 | 113 | 135 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu2g01027 | Vimu-Chr2 | 6611416 | 6625126 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu2g01027 | 5 | 80 | MAP Kinase Gene Family | AT5G19010 | 98.684 | 1.37e-44 | 156 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_MAPK | Vimu2g01027 | Pkinase | 1.9e-10 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu2g01027 | - | - | zju:107423242 | 207.223 |