Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00933 ATGGTGAGCGACAACAACCCTTATTATGGCACATTCCAAGGCGTCACCAATTATTATCCTCCGTCTTTTCCCTCTGCTTATCACCAACAACAACCTTATCATCTTCTTCCAGTTTATGCCGTTCCTGAAAGGCCATTGAGAGAACGTCGACTTCCCTTTTGTGGACTTGGTGTGGGATGGCTTTTGTTCATAATTGGTTGGTTTCTTGGTGGTGTTCCTTGGTACATTGGAGCTTTTGTTTTAGTATTTGTGCAAATGGATCATAGAGAAAAACCCGGACTCATTGCATGTGCATTGGCTTCGTTGGTTACTTTGATGGTGGTTGCCCTTGGTGTCACACAGGCAGATCTTCAAAAGTTTACATGA 366 0.4344 MVSDNNPYYGTFQGVTNYYPPSFPSAYHQQQPYHLLPVYAVPERPLRERRLPFCGLGVGWLLFIIGWFLGGVPWYIGAFVLVFVQMDHREKPGLIACALASLVTLMVVALGVTQADLQKFT 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00933 121 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 6 115 IPR044804 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00933 Vimu-Chr2 5865597 5867222 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00933 8 113 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 32.000 6.21e-22 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00933 - - var:108342711 235.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00933 2 5865597 5867222 Vimu2g00933 2 5865597 5867222 ECH