Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00932 ATGACCCCTCTCTTATCCTCTTTCTCCCTCACCGACATAGCCTCCTACCTCGTATGCTTCCTCCTCCTCCTCATTCTCCTCGAACAGATCTCCTACCTTGCCAAGAAGTCTTCCATCCCAGGACCCTCCTTCGTCGTGCCCTTCCTTGGAAACGCAATCCCATTGGTCCGCAATCCAACCAACTTCTGGGACCTTCAGTCCTCTTTGGCAAAGTCCACCCCTTTCGGCTTCTCCGCTAACTACATAATCGGCAACTTCATCGTTTTCATCAGAGACACCGAACTCTCCCACAAGGTCTTCGCCAATGTCAGGCCCGACGCTTTCCACCTCGTCGGCCACCCCTTCGGTAAGAAGCTATTCGGCGAACACAACCTCATCTACATGATGGGTCAAGAACACAAGAACCTCCGCCGTCGCATCGCCCCCAACTTCACCCCCAAAGCCCTCTCCACCTACACCGCGCTCCAGCAGATTATCATCCTTGATCACCTCAAGTCCTGGGTTGCCAAATCTCAAACCCAAACCGATTCCATTCCGCTCCGTATTCTGGCCCGTGACATGAATCTCGACACCTCCCAGACCGTCTTCGTGGGCCCCTACTTGGGCCTCAAAGCCAGGGAGCGCTTCGAGAGGGATTACTTTCTATTCAACGTTGGCCTTATGAAGCTTCCGATTGATTTCCCCGGCACCGCGTTTCGAAACGCGAGGCTCGCCGTGGACCGGCTCATCGAAACGCTGGCCACCTGCACCGAGATGAGCAAAACCAGGATGCAGAAAAGGGAAGAGCCTTCGTGTCTGATTGATTACTGGATGCAGGAAACGCTAAGGGAAATCGAGGAGGCCAAGCTCACCGGAGAGCCGGCGGCACCGTTCTCCACCGACGCCGAGATTGGTGGTTACCTCTTTGATTTTCTCTTTGCGGCGCAGGACGCGTCCACGTCGTCGTTGCTGTGGGCGGTGGCGCTGCTGGATTCGCATCCGGAGGTGCTGGCGAAGGTTAGGGCAGAGGTGGAAGGAGTCTGGTCGCCGGAGTCTGACGAGCTGATTACTGCGGAGATGCTCCGGGAGATGAAGTATACGCAGGCGGTGGCTCGTGAGGTAGTGAGGTTCCGGCCGCCGGCGACGCTGGTGCCGCATATCGCGGCTGAGAGGTTCCCGCTGACGGAGTCGTACACGATACCGAAGGGGGCGATCGTGTTCCCATCGGCGTTCGAGTCGTCGTTTCAGGGGTTCAGTGAACCGGAGCGGTTCGACCCGGAGCGGTTCTCGGAGGAGAGACAGGAGGACCAAGTATTTAAAAGAAACTTTCTGGCCTTCGGTGCTGGGCCCCACCAGTGTGTGGGTCAAAGGTACGCATTGAATCATCTGGTTCTCTTCATCGCGTTGTTCGCCACGTTGATCAATTTCAAGAGGGACAGAAGGGACGGTTGTGATGAGATCGCGTACGTACCCACCATATGCCCTAAAGACGATTGCAGGGTGTTTCTCTCGCAACGGTGCACACGATATCCTTCCTTCCCTGCGGTGGAAGACCTGATGAAATGA 1545 0.5618 MTPLLSSFSLTDIASYLVCFLLLLILLEQISYLAKKSSIPGPSFVVPFLGNAIPLVRNPTNFWDLQSSLAKSTPFGFSANYIIGNFIVFIRDTELSHKVFANVRPDAFHLVGHPFGKKLFGEHNLIYMMGQEHKNLRRRIAPNFTPKALSTYTALQQIIILDHLKSWVAKSQTQTDSIPLRILARDMNLDTSQTVFVGPYLGLKARERFERDYFLFNVGLMKLPIDFPGTAFRNARLAVDRLIETLATCTEMSKTRMQKREEPSCLIDYWMQETLREIEEAKLTGEPAAPFSTDAEIGGYLFDFLFAAQDASTSSLLWAVALLDSHPEVLAKVRAEVEGVWSPESDELITAEMLREMKYTQAVAREVVRFRPPATLVPHIAAERFPLTESYTIPKGAIVFPSAFESSFQGFSEPERFDPERFSEERQEDQVFKRNFLAFGAGPHQCVGQRYALNHLVLFIALFATLINFKRDRRDGCDEIAYVPTICPKDDCRVFLSQRCTRYPSFPAVEDLMK 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00932 514 FunFam Cytochrome P450 61 29 499 - -
Vimu2g00932 514 Pfam Cytochrome P450 40 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00932 514 Gene3D Cytochrome P450 31 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00932 514 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00932 514 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00932 514 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00932 514 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00932 514 PANTHER CYTOCHROME P450 26 39 463 - -
Vimu2g00932 514 SUPERFAMILY Cytochrome P450 35 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00932 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Vimu2g00932 514 CDD CYP61_CYP710 76 492 - -
Vimu2g00932 514 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00932 514 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00932 514 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00932 514 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00932 514 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00932 Vimu-Chr2 5847970 5849514 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00932 13 506 Cytochrome P450 AT2G34500 67.004 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00932 K09832 - gmx:100808148 913.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00932 2 5847970 5849514 Vimu2g00932 2 5847970 5849514 ECH