Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00910 ATGAGGAGAAACTGCAACTTGGAACTTGCCCTTTTCCCTCCCTCCGATTCTGGCCCTCTCCACCATCCCAGCAGGATTCAAGAGCCTACGGAGATCAGTCCGCTCGATCACCACCACCGCCAGGAACACCAACAACAACCACTCACAATTTTCTACGATGGCAAGATTTGTGTTGCAGATGTCACCGAGCTTCAGGCGAAATCTATTTTAATGCTTGCAAATGGAAAATTGGAAGAAAGAATGAGGACTGGAAGTGGGTCAGAGGCATCTTCTCCTACACTTTTGCAATCTCCCAATCAATTGTATAGTCCTGGCAGTGGCCTTTCTATGAGAAAATCGTTGCAACGCTTCCTTCTCAAGAGAAAGAATCGGGTTCAAGAAGCTTCTCCATACCATCACTAG 402 0.4701 MRRNCNLELALFPPSDSGPLHHPSRIQEPTEISPLDHHHRQEHQQQPLTIFYDGKICVADVTELQAKSILMLANGKLEERMRTGSGSEASSPTLLQSPNQLYSPGSGLSMRKSLQRFLLKRKNRVQEASPYHH 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00910 133 MobiDBLite consensus disorder prediction 84 107 - -
Vimu2g00910 133 MobiDBLite consensus disorder prediction 80 107 - -
Vimu2g00910 133 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 29 131 IPR040390 -
Vimu2g00910 133 SMART tify_2 41 75 IPR010399 -
Vimu2g00910 133 Pfam tify domain 44 74 IPR010399 -
Vimu2g00910 133 Pfam Jas motif 111 131 IPR018467 -
Vimu2g00910 133 ProSiteProfiles Tify domain profile. 41 75 IPR010399 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00910 1 132 Tify Gene Family AT1G30135 40.714 2.21e-22 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vimu2g00910 tify 7.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00910 - - gmx:100500349 214.157