Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00872 ATGCACACCAATTCATATATGCTTTTCCTCAAGGGTATGACACCCTGTTGGAGAAAGAGGAACACAATTGTCAGAAGGACAAAAGCAGCGGATAGCCATTGCAAGAGCCTGAAAGACCCTAAAATCCTCTTGCTTGATGAAGCAACTAGTGCACTTATTGCCGAGTCAGAGAAAGTAGTTCAAGAGGCTCTAGATAGAGTAAGTGTGAATAGAACTACAGTAGTAATAGCTCACCGTCTTACAACAATTAAAGGGGATATAATAGTTGTAATGAAAGATGAAGCGGTAGCTGAAAAGGGAAAACATAATGAGTTGATGAAGATTATCAATGGAGTCTATGCATCATTGATTGTTCTACATACCACTCCATAG 372 0.3952 MHTNSYMLFLKGMTPCWRKRNTIVRRTKAADSHCKSLKDPKILLLDEATSALIAESEKVVQEALDRVSVNRTTVVIAHRLTTIKGDIIVVMKDEAVAEKGKHNELMKIINGVYASLIVLHTTP 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00872 123 Gene3D - 37 119 IPR027417 -
Vimu2g00872 123 PANTHER ABC TRANSPORTER B FAMILY 37 118 IPR039421 -
Vimu2g00872 123 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 117 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00872 Vimu-Chr2 5412302 5412673 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00872 37 120 Calmodulin-binding Proteins AT2G36910 60.465 3.14e-25 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00872 K05658 - gmx:100792531 128.257