Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00853 ATGATTACACTGCATGACAACTACGGGGCAAGAAAATTCCTTCTCTTTAAACTGCGTAGCATTGGATGCAATCCATATGCCAGAGCTACGTATACGAGAGATGGTAGAGGTTGTGCTCGACAGCTGAACGATGCTGCGTTACTTTTCGACAGAAAGCTTGAATCTGAAGTGGAGCGATTGAATGAAAACGAGTTATCTTCTAAAGCCAAATTCGTGGTCGTAAACAGCGAAACCAACACTGGTTTCACTGATGCGGATACTCCTTGCTGTCCAACGGTGCAAAATTTTACGTGTGTTCCAAATGGAATACCCTGCAGCAATAGAGATGAAGTCCGCTTTTACGATGGAATCCATGGAACAGAAAATACCAACAGGTTCACCGCAGGAATAGTACGTCAGGCTGTGCGGAGCCTTCTGGACTGA 423 0.4515 MITLHDNYGARKFLLFKLRSIGCNPYARATYTRDGRGCARQLNDAALLFDRKLESEVERLNENELSSKAKFVVVNSETNTGFTDADTPCCPTVQNFTCVPNGIPCSNRDEVRFYDGIHGTENTNRFTAGIVRQAVRSLLD 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00853 140 Pfam GDSL-like Lipase/Acylhydrolase 7 127 IPR001087 GO:0016788
Vimu2g00853 140 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 7 129 - -
Vimu2g00853 140 Gene3D SGNH hydrolase 1 138 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00853 Vimu-Chr2 5274122 5274631 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00853 4 138 Pollen Coat Proteome AT1G75930 30.201 3.24e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00853 - - vra:106775351 266.544