Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00852 ATGATTACACTGCACGACAACTACGGGGCAAGAAAATTCCTTATCTTTAGACTGGGTAAAATTGGATGCAATCCATTTGCCAGAGCTACGTATACGAGAGATGGTAGAGGTTGTGCTCGACAGCTGAACGATGCTGCGTTACTTTTCGACAGAAAGCTTGAATCTGAAGTGGAGCGATTGAATGAAAACGAGTTATCTTCTAAAGCCAAATTCGTGGTCGTAAACAGCGAAACCAACACTGGTTTCACCGATGCGGATACTCCTTGCTGTCCAACGGTGCAAAATACGACGTGTATTCCGAATGGAATACCCTGCAGCAATAGAGATGAAGTCCGCTTTTACGATGGAATCCATGGAACAGAAAATACCAACAGGTTCACCGCAGGAATAGTACGTCAGGCTGTGCGGAGCCTTCTGGACTGA 423 0.4563 MITLHDNYGARKFLIFRLGKIGCNPFARATYTRDGRGCARQLNDAALLFDRKLESEVERLNENELSSKAKFVVVNSETNTGFTDADTPCCPTVQNTTCIPNGIPCSNRDEVRFYDGIHGTENTNRFTAGIVRQAVRSLLD 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00852 140 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 7 129 - -
Vimu2g00852 140 Gene3D SGNH hydrolase 1 138 IPR036514 -
Vimu2g00852 140 Pfam GDSL-like Lipase/Acylhydrolase 7 127 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00852 Vimu-Chr2 5262888 5263397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00852 4 138 Pollen Coat Proteome AT1G75930 30.201 2.05e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00852 - - vra:106775351 261.151