LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu2g00852	ATGATTACACTGCACGACAACTACGGGGCAAGAAAATTCCTTATCTTTAGACTGGGTAAAATTGGATGCAATCCATTTGCCAGAGCTACGTATACGAGAGATGGTAGAGGTTGTGCTCGACAGCTGAACGATGCTGCGTTACTTTTCGACAGAAAGCTTGAATCTGAAGTGGAGCGATTGAATGAAAACGAGTTATCTTCTAAAGCCAAATTCGTGGTCGTAAACAGCGAAACCAACACTGGTTTCACCGATGCGGATACTCCTTGCTGTCCAACGGTGCAAAATACGACGTGTATTCCGAATGGAATACCCTGCAGCAATAGAGATGAAGTCCGCTTTTACGATGGAATCCATGGAACAGAAAATACCAACAGGTTCACCGCAGGAATAGTACGTCAGGCTGTGCGGAGCCTTCTGGACTGA	423	0.4563	MITLHDNYGARKFLIFRLGKIGCNPFARATYTRDGRGCARQLNDAALLFDRKLESEVERLNENELSSKAKFVVVNSETNTGFTDADTPCCPTVQNTTCIPNGIPCSNRDEVRFYDGIHGTENTNRFTAGIVRQAVRSLLD	140

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu2g00852	140	PANTHER	GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED	7	129	-	-
	Vimu2g00852	140	Gene3D	SGNH hydrolase	1	138	IPR036514	-
	Vimu2g00852	140	Pfam	GDSL-like Lipase/Acylhydrolase	7	127	IPR001087	GO:0016788

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu2g00852	Vimu-Chr2	5262888	5263397	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vimu2g00852	4	138	Pollen Coat Proteome	AT1G75930	30.201	2.05e-10	55.5

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu2g00852	-		-	vra:106775351	261.151

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