Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00804 ATGAAGAGTGGTTGTGATGAATGGAAGCCTTTTATAGTAATGATAGCAATTGATTTTTCTTTTGCTGTAGTGAATATTCTTCTCAAGAAAGTCCTTGAAAAGGGGGTGAACCATTTGGTTTTTATCACATACCGCTTGACAATTGCTACCATTTTCATAGCCCCCGTCGCCTACTTTAAAGAAAGGTTGAAACGACAGACCAAGGCTCACATTTCGAATATTATGTTACCTCTTCTGCAGTGCCATTGTTGGCACTTATTTTCTCCTCGTGAACTTCCAAATTCTCTGCTTTTGGATGATTGTCGGGAGATACTTACTGAATACAACTTTTTTTATAGGGCATCAGTCACTCAATACTTTGTCCTTGTGGGGATACAATATACTTCTGCTACCTTCTCTTGTGCTTTCATCAACATGGTGCCAGTGGGTAACCGTGTCCTTTATCCCTTTATATCTTACAGATTAGAGACTGTGAAAATCAAATGCAACAGTGGGAGAGCTAAGATTCTCGGTTCACTGGTGTGCATAGGTGGCGCATTGATGTTGACACTTTACAAAGGAAAGCCACTGGTTAATTTTTCTCACCACGAATCCGCAGCTTCTATGGTCAAGAGTTCTGCAGTGAATATATATTCTACAAGGACAACGGAGAGATGGACTATTGGTGTAATAGCCATGGTTATAGGAACCATCTTTTGGTCTTCTTGGTATATTTTACAGTCAAAAATAAGCAAGAGATATCCATGCCAGTATTCTAGCACAGCCATCATGAGCTTCTTTGGAGCCCTTCAATCAGCTGTTATTTGCTTGTGCACTGACCACAACTTGTCCATTTGGGTTCTCAAGGGAAAGATACAAATCATTGCTTTTCTATATTCTGGGATAATAGGATCAGGTTTGTGTTTTGTGGGAATGTCATGGTGTGTGAAGAAGAGGGGTCCTGTCTTTACTGCAGCATTCAGTCCTCTTGTTCAGATAATAGCAGCAATGATTGATATACCAGTCTTGCATGAACAGCTCCATCTTGGAAGTGTGATGGGATCCATCTTGGTGATTATTGGATTATACATTCTTCTATGGGGTAAGAGCATGGACATTAAGAATCGTGTGAGAAAGTTAGTCCAAGAAGCTGAAGAAACCAAGGAACAAGAGCCGCAGCCGCAAATACAACAGTTGACAGTGTATGTTCACACAGAATCGTGTGATTCGTAG 1212 0.4059 MKSGCDEWKPFIVMIAIDFSFAVVNILLKKVLEKGVNHLVFITYRLTIATIFIAPVAYFKERLKRQTKAHISNIMLPLLQCHCWHLFSPRELPNSLLLDDCREILTEYNFFYRASVTQYFVLVGIQYTSATFSCAFINMVPVGNRVLYPFISYRLETVKIKCNSGRAKILGSLVCIGGALMLTLYKGKPLVNFSHHESAASMVKSSAVNIYSTRTTERWTIGVIAMVIGTIFWSSWYILQSKISKRYPCQYSSTAIMSFFGALQSAVICLCTDHNLSIWVLKGKIQIIAFLYSGIIGSGLCFVGMSWCVKKRGPVFTAAFSPLVQIIAAMIDIPVLHEQLHLGSVMGSILVIIGLYILLWGKSMDIKNRVRKLVQEAEETKEQEPQPQIQQLTVYVHTESCDS 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00804 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 284 363 - -
Vimu2g00804 403 PANTHER WAT1-RELATED PROTEIN 9 366 IPR030184 GO:0016020|GO:0022857
Vimu2g00804 403 Coils Coil 363 383 - -
Vimu2g00804 403 Pfam EamA-like transporter family 221 359 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00804 Vimu-Chr2 4926049 4928338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00804 6 367 Nodulin-like Gene Family AT1G11460 34.066 4.64e-69 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00804 - - gmx:100803670 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03746 11 59478133 59480163 Vimu2g00804 2 4926049 4928338 PCT