Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00788 ATGGCCAACCCTGGAGTGGAAAGATTCCCCGAGTTCTACGAGAAGTGGACTGCCAAGCTTGAGGATATTCTCCAAAAGCTTATGCAGGTGTCCAACCAGAGAACTGAGGTGGTCAAGACTCAGCAAGAGCTGCAAGCTTTGGTGTCAACAGTCACAACCCATTTGAAGTTATACTACACTACCAAATGGGCTGCTGCACATGGAAACGTTCTGATTTTCTTTTCTCCGCCCTGGCTGAACCCTTTGGAGCATGCTCAGCTTTGGTTGTCGGGGTGGAAGCCGTCCACGGTGTTCAGGCAGGTGGAGAATCTGAAAAACAGGAACGTTTTGGTGTTGACGGAGGAGCAGAATAAGAAGATAGAGGAGCTGAAGATGAGGGTAAAGATGGAGGAGGAGAAGGTGGAGAGGGAGATGGAGAGGCAGCAGGTGGCCATGGCGGACCGCAAGATGGTGCAGTTGGCCAAAATCACGGGCCGCGCAAGGGCCAATGGTTCGGCGGATGCTGTTGGCGAAGTGGCAGTGAAGGAGGTTGTTGAAGGGCTGGAGAAGGTCATGAAGGCTTCCGATTGCGTGAGGCTCAAGACACTCAAAGGGGTGTTGGATTTGCTTAGTCCAATGCAGAGTGTGGACTTTCTGGCGGCGAATATAACTACGCAGCTGCGATTCAAGAAATGGGGGACGAAGAAGAAGGACACCGCTGGGCCGGTGCTCAATGCGAATCAAGACAAGTGA 732 0.5232 MANPGVERFPEFYEKWTAKLEDILQKLMQVSNQRTEVVKTQQELQALVSTVTTHLKLYYTTKWAAAHGNVLIFFSPPWLNPLEHAQLWLSGWKPSTVFRQVENLKNRNVLVLTEEQNKKIEELKMRVKMEEEKVEREMERQQVAMADRKMVQLAKITGRARANGSADAVGEVAVKEVVEGLEKVMKASDCVRLKTLKGVLDLLSPMQSVDFLAANITTQLRFKKWGTKKKDTAGPVLNANQDK 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00788 243 ProSiteProfiles DOG1 domain profile. 6 232 IPR025422 GO:0006351|GO:0043565
Vimu2g00788 243 Coils Coil 113 149 - -
Vimu2g00788 243 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 8 233 - -
Vimu2g00788 243 Pfam Seed dormancy control 26 101 IPR025422 GO:0006351|GO:0043565
Vimu2g00788 243 Coils Coil 13 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00788 Vimu-Chr2 4821502 4822233 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00788 2 221 bZIP Transcription Factor Family AT5G06960 26.457 4.51e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00788 - - pvu:PHAVU_006G175000g 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00788 2 4821502 4822233 Vimu2g00788 2 4821502 4822233 ECH