Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00774 ATGCCCGACTTTAACGATTCCATCGCGCCGCCGTCGCGCCCCGTCCCCGTTCGCGAGGACTGCTGGTCTGAGGAGGCCTCTTCCACGCTTGTTGACGCCTGGGGCCGACGCTACCTCGAGCTCAACCGCGGCAACCTCCGCCAGAAGGATTGGCAGGATGTCGCCGATGCTGTCAACGCGCTCCACGGACATACCAAGAAGACGCACCGCACAGACGTCCAGTGCAAGAACCGCATCGATACCATAAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCGTCCTCCAATGGTACTCTCTCTTCCTCCTGGCCTTTCTACGAACGATTGGATGCTCTGATTGGCCCTAATTTCAACGCCAAGAAACCTCCTTCCTCCTCGCCGTCTCCTTCGCCGCCTGTGGCTCTTCCGCTGCTTCCGCATCGGAAGAACCCTTCCTCCTCGCCTGCGATTGCGGTAGAACCGAGGGCCGTTGCGCTGCCTCAGAAGCGCTCCGCCGCTGCGGCGGCGATGGACGAGGGTTATTTCAGAAGGAATTACTCCGCTGTTGCTGCGGCTGCGGCGGCTGCGGAGGCTGACGAAGACGAGGAGGAAGAGGAAGAGGAGGAGGCGGACGACGTGGAGGAGGAGGAGGACGAAGATGAAGGGAGGGGGAGCGAGGTGGAGGAAGGGGAGAAGGAGAGGGAAGGGATGAGGAGGCTGGCGAAGGCGATAGAGAGGTTTGGTGAAGTGTATGAGAGAGTGGAGGGTCAGAAGCTGAGGCAGATGGTGGATTTGGAGAAACAGAGGATGCAGTTTGCTAAAGATCTTGAAGTTCAGAGGATGCAGATGTTTATGGACACACAGGTTCAGCTCGAGAGAATTAAGCGCGGGAAACGATCTGGCTCTAACGGTGAGATACAATTTCTTTCTACCTTTTTTCCTTTTGGCTTGATTTGA 939 0.5687 MPDFNDSIAPPSRPVPVREDCWSEEASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSSSNGTLSSSWPFYERLDALIGPNFNAKKPPSSSPSPSPPVALPLLPHRKNPSSSPAIAVEPRAVALPQKRSAAAAAMDEGYFRRNYSAVAAAAAAAEADEDEEEEEEEEADDVEEEEDEDEGRGSEVEEGEKEREGMRRLAKAIERFGEVYERVEGQKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKRSGSNGEIQFLSTFFPFGLI 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00774 312 MobiDBLite consensus disorder prediction 187 231 - -
Vimu2g00774 312 MobiDBLite consensus disorder prediction 190 220 - -
Vimu2g00774 312 MobiDBLite consensus disorder prediction 118 149 - -
Vimu2g00774 312 Coils Coil 183 217 - -
Vimu2g00774 312 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 11 292 IPR044823 -
Vimu2g00774 312 FunFam trihelix transcription factor ASIL2 22 88 - -
Vimu2g00774 312 Gene3D - 22 88 - -
Vimu2g00774 312 Pfam Myb/SANT-like DNA-binding domain 19 113 IPR044822 -
Vimu2g00774 312 MobiDBLite consensus disorder prediction 123 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00774 Vimu-Chr2 4743354 4744292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00774 18 168 Trihelix Transcription Factor Family AT3G14180 43.558 1.55e-35 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vimu2g00774 Myb_DNA-bind_4 6.1e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00774 - - gmx:100815241 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00774 2 4743354 4744292 Vimu2g00774 2 4743354 4744292 ECH