Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00767 ATGTCAACTCCTTCATCATCTTCTTCTATTTGGGTGTTCTCAAACATAAAGCTTCAGTTCTTTGCCCGCATCAGACGGTTTCTCCAATCCAAAGCAACCAGAAAGCGTTCTGATACCTCCGATCGGTTTGACGTGGCTAAGGGCAGTGGTGAACACAAGAAGGCTGAAAATATTGAAACAGTACAGGTTATGCAGAAGACTGAAGAGGAGGAGGAAGAAGTTTCTGCGATCATGTTCAAGAGAACTGTCAAGATGCTTCACTTCGGAAACTGGGAAGAGAAGGAAGTGGCGGCAAAAGAGATTGAAAAGTTAGCCAAGGAAGATGTTAAGGTCAGAAAGTTGATTACAGAACTTGGGGTGGTGCCGGTTTTGGTATCTATGGCGGCGTCGCCAGTGGCTAGCCGCAGGCGAGCCGGGTTGACGGCGTTGGTCCACCTGGCTGATGGAACTTACACGAACAAGGCTTTGATAGTTGAGGCAGGAATATTGTCGAAGCTGCCAAAGACAATGGACCTTGTAGATGAATCAATAACAAGTAAATTGGCAGAGTTGCTTTTGTCACTGTCATCACTAGTAAACACTGAGTTCCCTCTTGCTTCATTAGACTTTATCCCATTACTTAGGCACATTTTTGAGACAGAGACATGTTTTGACACGAAAGAATCGTGTTTGAGTGCTTTGTATAACCTATCAACTGTATTAGAAAATGCATCGGCTATGGTTTCAAGTGGGTTGGTCCCTATCCTCTTGGAAGCGTCATCGTTAAAAGAAATTTCAGAGAAAGCACTTGCCACTCTAGGGAACTTGTCAGTGACTTTGATGGGGAAGAAAGCAATAGAGAACAGCACAATGGTCCCAGAAATCTTCATTGATATTTTGTCATGGGAAGATAAGCCTAAATGCCAAGAGTTATCGGTGTATATTTTAATGATTCTAGCACATCAAAGTTCGTTGCAAAGAAAGAAGATGGCACAGGCAGGGATTGTTCCTGTGCTTCTTGAAGTGGTTTTATTGGGCAGCCCTTTGGCTCAAAAGAGAGCAATGAAACTATTGCAATGGTTTAAGGATGAAAGGCAGACTAAGATGGGGCCACATTCTGGTCCACAAACACCAAGATTTGCAATGGGATCACCTTTAAATCAAAGAGAAGCAAAAGAAGGGAAGAAAATGATGAAGAGTTTGGTGAAACAGAGTCTGCAAAGGAATATGCAAATAATAACTCACAGGGCAAATGCTGCAGGGGAGTCTTCTAAATTGAAGTCTTTGATCATCAGCACAAGTTCCAAGAGTTTGCCTTACTAA 1302 0.4286 MSTPSSSSSIWVFSNIKLQFFARIRRFLQSKATRKRSDTSDRFDVAKGSGEHKKAENIETVQVMQKTEEEEEEVSAIMFKRTVKMLHFGNWEEKEVAAKEIEKLAKEDVKVRKLITELGVVPVLVSMAASPVASRRRAGLTALVHLADGTYTNKALIVEAGILSKLPKTMDLVDESITSKLAELLLSLSSLVNTEFPLASLDFIPLLRHIFETETCFDTKESCLSALYNLSTVLENASAMVSSGLVPILLEASSLKEISEKALATLGNLSVTLMGKKAIENSTMVPEIFIDILSWEDKPKCQELSVYILMILAHQSSLQRKKMAQAGIVPVLLEVVLLGSPLAQKRAMKLLQWFKDERQTKMGPHSGPQTPRFAMGSPLNQREAKEGKKMMKSLVKQSLQRNMQIITHRANAAGESSKLKSLIISTSSKSLPY 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00767 433 MobiDBLite consensus disorder prediction 360 387 - -
Vimu2g00767 433 SMART arm_5 108 148 IPR000225 GO:0005515
Vimu2g00767 433 SMART arm_5 150 190 IPR000225 GO:0005515
Vimu2g00767 433 SMART arm_5 232 271 IPR000225 GO:0005515
Vimu2g00767 433 SUPERFAMILY ARM repeat 83 354 IPR016024 -
Vimu2g00767 433 Gene3D - 52 404 IPR011989 -
Vimu2g00767 433 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00767 Vimu-Chr2 4674036 4676574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00767 78 379 U-box Gene Family AT1G67530 30.625 1.09e-20 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00767 - - gmx:100819002 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00767 2 4674036 4676574 Vimu2g00767 2 4674036 4676574 ECH