Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00753 ATGAGGCGAGTTATGATTATAGTGATAGCATTTATGCTTATAACTTATTTTTCTTTAACCTCTTCAAAATCAGAATCATGCCCTTACTCCTCCATATTCAGCTTCGGTGATTCTCTCGCCGACACCGGCAACCTCTATCTCAGTTCACCACCACTTTCCGACAACTGCTTCTTCCCTCCTTACGGTGAAACCTTCTTTCACAATGTCACAGGACGCTGCTCCGATGGTCGTCTCATCATCGATTTCATCGCTGAGTTTCTTGGGATGCCATCGGTGAAACCGTATCTGGAAAAGAAGAATATTGGTGGATGGAGTTGGAAAGACGGAGTAGCCAATTTTGCAGTTTCAGGAGCGACGGCGATGGACTCGACCTTCTTTCAAGAAAGAGGCGTTCCTGTCAAAACCAACTATTCTTTGTCAGTTCAACTCACTTGGTTTAAGGAACTGCTTTCTACAATTTGTAATTCTTCTTCCCAAAGTTGCCATGAAGAGGTTAAGAACTCATTATTTCTTGTGGGTGAAATAGGTGGAAACGATTTCAATCATCCTTTGGTTGTAGGAAAGAGCATAGCAGAAGTTAAATCGTATGTGCCTAATGTCATCGATACTATATCTTCAATAACCAAAGAGTTAATTGGTCTAGGGGCTCACACGCTCATGATTCCTGGGATTTTACCTTTTGGATGTAGTGCAAATTATTTAACAATTTATGAAACCAAAGTTGAGAATCAATATGACAAATTTGGATGTTTGAAGTGGTTAAACGAGTTTATTGAATATTACAACCATAAGCTCCAAATGGAATTAAATAAGTTTCGAGCTCTTCATCCTCACGTTAATATTATCTATGTTGATTATTACAATGCTGCAATGACTTTATATCGTCGTCCTGCAAAATTTGGATTTATTGGTCTTGAAACCTGTTGTGGAAAGGGAGGTCCATACAATTTCAATGAATCAATGAAGTGTGGGGATCCAGGCGTGAAAGCTTGTGATGATCCTTCCAAGTATATTGGATGGGATGGAAAACATTTAACTGAAGCTGCTTATAAATTAATCGCTCAAGCTTTTATAAAAGGGCCATATTCTCTCCCTCAGTTTAGTTCACAGTGTTTAACTAATACAAATTTTGGTTATACACGTACCTTTAAGTATTAA 1158 0.3851 MRRVMIIVIAFMLITYFSLTSSKSESCPYSSIFSFGDSLADTGNLYLSSPPLSDNCFFPPYGETFFHNVTGRCSDGRLIIDFIAEFLGMPSVKPYLEKKNIGGWSWKDGVANFAVSGATAMDSTFFQERGVPVKTNYSLSVQLTWFKELLSTICNSSSQSCHEEVKNSLFLVGEIGGNDFNHPLVVGKSIAEVKSYVPNVIDTISSITKELIGLGAHTLMIPGILPFGCSANYLTIYETKVENQYDKFGCLKWLNEFIEYYNHKLQMELNKFRALHPHVNIIYVDYYNAAMTLYRRPAKFGFIGLETCCGKGGPYNFNESMKCGDPGVKACDDPSKYIGWDGKHLTEAAYKLIAQAFIKGPYSLPQFSSQCLTNTNFGYTRTFKY 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00753 385 SUPERFAMILY SGNH hydrolase 31 360 - -
Vimu2g00753 385 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 12 366 - -
Vimu2g00753 385 CDD SGNH_plant_lipase_like 31 361 IPR035669 -
Vimu2g00753 385 Gene3D SGNH hydrolase 18 360 IPR036514 -
Vimu2g00753 385 Pfam GDSL-like Lipase/Acylhydrolase 32 357 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00753 Vimu-Chr2 4581356 4585857 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00753 1 358 Pollen Coat Proteome AT1G75930 28.184 1.63e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00753 - - gmx:100816865 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00753 2 4581356 4585857 Vimu2g00753 2 4581356 4585857 ECH