Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00752 ATGAACGGGGAAGATAGAATTCCAATGAGGCGAGTTATGATTATAGTGATAGCATTTATGCTTATAACTTATTTTTCTTTAACCTCTTCAAAATCAGAATCATGCCCTTACTCCTCCATATTCAGCTTCGGTGATTCCCTCGCCGACACCGGCAACCTCTATCTCAGTTCACCACCACTTTCCGACAACTGCTTCTTCCCTCCTTACGGTGAAACCTTCTTTCACAATGTCACAGGACGCTGCTCCGATGGTCGTCTCATCATCGATTTCATCGCTGAGTTTCTTGGGATGCCATCGGTGAAACCGTATCTGGAAAAGAAGAATATTGGTGGATGGAGTTGGAAAGACGGAGTAGCCAATTTTGCAGTTTCAGGAGCGACGGCGATGGACTCAACCTTCTTTCAACAAAGAGGCGTTCCTGTCAAAACCAATTATTCTTTGTCAGTTCAATTGACTTGGTTTAAGGAACTGCTTTCTACTCTTTGTAATTCTTCTTCCCAAAGTTGCCATGAAGAGGTTAAGAACTCATTATTTCTTGTGGGTGAAATAGGTGGAAACGATTTCAATCATCCTTTGGTTGTAGGAAAGAGCATAGCAGAAGTTAAATCGTATGTGCCTAATGTCATCGATACTATATCTTCAATAACCAAAGAGTTAATTGGTCTAGGGGCTCACACGCTCATGGTTCCTGGGATTTTACCTTTTGGATGTAGTATAGTGTATTTAACAATTTATAAAACGAAAGCGGAGAAGCAATATGACAAATTTGGATGTTTGAAGTGGTTAAACGAGTTTACTGAAAATTACAACCATAAGCTCCAAATTGAATTGAATAAGCTTCGAGCTCTACATCCTCACGTTAATATTATCTATGTTGATTATTACAATGCTGCAATGGCTTTATATCGTCATCCTGCAAAATTTGGACTTATTGGTTTTAAAGCTTGTTGTGGAAAGGGAGGTCCATATAATTTCAACGAATCAATGAAGTGTGGCGATCCAAGCGTGAAAGCTTGTGATGATCCTTCCAAGTATATTGGATGGGATGGAAAGCATTTAACTGAAGCTGCTTATAAATTAATCGCTCAAGCTTTCATAAAAGGGCCATATTCTCACCCTCCGTTTAGTTCCCTGTGTTTGACTGATGTAAATTTTGGTTATACATATACCTTTTAA 1176 0.392 MNGEDRIPMRRVMIIVIAFMLITYFSLTSSKSESCPYSSIFSFGDSLADTGNLYLSSPPLSDNCFFPPYGETFFHNVTGRCSDGRLIIDFIAEFLGMPSVKPYLEKKNIGGWSWKDGVANFAVSGATAMDSTFFQQRGVPVKTNYSLSVQLTWFKELLSTLCNSSSQSCHEEVKNSLFLVGEIGGNDFNHPLVVGKSIAEVKSYVPNVIDTISSITKELIGLGAHTLMVPGILPFGCSIVYLTIYKTKAEKQYDKFGCLKWLNEFTENYNHKLQIELNKLRALHPHVNIIYVDYYNAAMALYRHPAKFGLIGFKACCGKGGPYNFNESMKCGDPSVKACDDPSKYIGWDGKHLTEAAYKLIAQAFIKGPYSHPPFSSLCLTDVNFGYTYTF 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00752 391 Pfam GDSL-like Lipase/Acylhydrolase 40 365 IPR001087 GO:0016788
Vimu2g00752 391 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 20 373 - -
Vimu2g00752 391 CDD SGNH_plant_lipase_like 39 369 IPR035669 -
Vimu2g00752 391 Gene3D SGNH hydrolase 26 368 IPR036514 -
Vimu2g00752 391 SUPERFAMILY SGNH hydrolase 39 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00752 Vimu-Chr2 4564770 4568941 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00752 9 366 Pollen Coat Proteome AT1G75930 28.495 1.04e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00752 - - gmx:100816865 520.776