Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00737 ATGGAACAAGAGCATCATACTCAGGAACAAGAACATAAACAAGATCAGACATTAAGCATGGAAAGGATCAAAACCTTAGAGCGCATTGTCGTAATCCCTTCTCAGCCTCCCTTCCTTCAGGACCACTCACTCCCTCTCTCCCACCTCGACACCGACCCCAACCTTCACCTCACCTTTCGTTACCTCCGCGCGTACACTTCAACCGCTTCACCTACCTCCCTCCACCCTTTCAACGTCATCTCCTCCTCCCTCTCCAACGCGCTCACCCAATTCTACCCCCTCGCCGCCACACTACGTCGCCGCCCAACCTCCCCCCACCGTCTCGAACTCTGGTGTGCCGCTGCCCAGGGCATTCCCCTCGTCCGCGCTGCCGCCGATTTCACTCTCCACTCCGTCAACCACCTGGACGACCCGGCCTCGCCTCTCGCGGAGCAGTTGGTGCCCGACCCGGGTCCCGAGGAGGGACTGGAACACCCCTGCATACTCCAGGTGACGGTCTTCGCGTGCGGCGGGTTCGTCCTTGGCGCCGCCATGCACCATGCACTATGCGACGGCATGGGGGGCACTCTGTTCTTCAACGCGGTGGCGGAGCTGGCGCGCGGGGCCACGCGGATGACGGTGGAGACGGTGTGGGAGCGTGATAGGCTTTTGGGTCCCAGAAAGCCGCCGAGAGTGGATTCACCGTTGATCGATGAGTTTCTGCGTTTGGAAAAAGGGGTTTTGCCGTACGAGGAGGGCGTTGGGGGGGTTGCGAGAGAGTGCTTTCACGTGAAGGATGAGTGCTTGGACATGTTGAAGAGATCATTGTTGGAGCAATCCGGGTTCAACTTCACCGTTTTTGAGGCTCTTGGTGCCTACATTTGGAGAGCCAAGGTGATGGCATCTGGAGTTCAGGGTGAGGAGAAGGTGAAGTTTGCATACTCAATCAACATACGGAGATTGGTAAAGCCAGCAGTCCCTGGTGGGTATTGGGGCAATGGTTGTGTGCCAATGTACGTGGTGTTGAGTGCGAAGGAGTTGATAGAGAGACCCATCTGGGAAACTGCAGAGCTAATAAAAAAGAGTAAAAGCAATGTGAGCGATGAGTATGTGCGGTCTTACATAGATTATCAGGAGCTGCATTTTGGTGATGGGATCACAGCAGGAAGAGAGGTGAGTGGATTCACCGATTGGAGGCATTTGGGCCACTCAACTGTAGACTTTGGGTGGGGAGGCCCAGTTACTGTTTTGCCCCTTGGAAGGAACCTGCTTGGGAGTGTTGAGCCTTGTTTCTTTTTGCCTTATTCAACTGCCTCTTCTCAGAATAAAGAGGGCTTCAAAGTTTTGGTCACTCTGAGACATTCTGCATTACCAGCTTTCAGACAAGCCATGCAAGTCTTTTCCACAACCCAAGACCACTGGCCCAGTCACATATAG 1416 0.5459 MEQEHHTQEQEHKQDQTLSMERIKTLERIVVIPSQPPFLQDHSLPLSHLDTDPNLHLTFRYLRAYTSTASPTSLHPFNVISSSLSNALTQFYPLAATLRRRPTSPHRLELWCAAAQGIPLVRAAADFTLHSVNHLDDPASPLAEQLVPDPGPEEGLEHPCILQVTVFACGGFVLGAAMHHALCDGMGGTLFFNAVAELARGATRMTVETVWERDRLLGPRKPPRVDSPLIDEFLRLEKGVLPYEEGVGGVARECFHVKDECLDMLKRSLLEQSGFNFTVFEALGAYIWRAKVMASGVQGEEKVKFAYSINIRRLVKPAVPGGYWGNGCVPMYVVLSAKELIERPIWETAELIKKSKSNVSDEYVRSYIDYQELHFGDGITAGREVSGFTDWRHLGHSTVDFGWGGPVTVLPLGRNLLGSVEPCFFLPYSTASSQNKEGFKVLVTLRHSALPAFRQAMQVFSTTQDHWPSHI 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00737 471 Pfam Transferase family 23 457 - -
Vimu2g00737 471 Gene3D - 248 458 IPR023213 -
Vimu2g00737 471 PANTHER ACYL TRANSFERASE 4 24 460 - -
Vimu2g00737 471 Gene3D - 19 231 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00737 Vimu-Chr2 4480119 4481867 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00737 53 455 Monolignol Biosynthesis Gene Families AT5G48930 27.163 1.93e-32 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00737 - - vra:106774544 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00737 2 4480119 4481867 Vimu2g00737 2 4480119 4481867 ECH