Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00733 ATGGGTTCAGGCTATTGGTTTAAGACAATAATTAGATTAAGAAAATCAAAACAAGGCAGATCAAAGAAAGCAAAGGGTATCTTAGCTCAAGAGAAACTAAATGCATCAAAGTCAAACAATTATACCGGGAAAGAGTCTAGTGATTTAGCAAATGGTATTAAAAGTGAAAACCTTGTCTCACCTGGGGTGTCAGTTGAAACTATTGCTGCAACAAGGATCCAGACTGCATTCCGAGCTTATAAGGCTAGAAAGGCTTTACGCCGCGTGAAAGGATTTTCAAAACTGAAGATCTTAACAGAGGGTTTCTCTGTTAAAAAGCAAGCCAGTTCAGCTATAACATACCTTCACTCATGGAGCAAGATTCAAGCCGAGATCAGAGATCGTCGAATATGTATGGTAACAGAAGACAGGATCAGGAGGAAGAAACTAGAGTCTCAACTAAAACTGGAAGCAAAGCTTCATGATCTGGAGGTTGAATGGTCTGGTGGTTCTGCAACCATGGAGGAAATCCTTGGGAAGATACATCAGAGGGAAGAAGCAGCAGTTAAGCGCGAAAGAGCCATGGCATATGCCTTTTCCCATCAGTGGAGGGCAAACTCTAGTCAGAGCCAACTGCTAGGTAGTTATGAACTTAGCAAGGCTAATTGGGGTTGGAGCTGGAAGGAACGGTGGGTTGCTGCTCGGCCATGGGAAAGCCGCATCTCCGGCTTATCTGTCACCCCAGAGAAAACTCACCATAAGCAGCCAAGTAAGGTTCAGAAGGATAAGAACACACCACCAAAAACTCCTGTACCAGTTAAACCTTCTTTAGCCATTGCAAAAGGGACTCCTCCTTCTGCCAATGCAAAAGGCAATTCAAAAGCTAGGAGATTGTCTTATCCACCGACTGCCGAGAAAACTGTAGTTCAAGGAGTGCAATGA 921 0.4376 MGSGYWFKTIIRLRKSKQGRSKKAKGILAQEKLNASKSNNYTGKESSDLANGIKSENLVSPGVSVETIAATRIQTAFRAYKARKALRRVKGFSKLKILTEGFSVKKQASSAITYLHSWSKIQAEIRDRRICMVTEDRIRRKKLESQLKLEAKLHDLEVEWSGGSATMEEILGKIHQREEAAVKRERAMAYAFSHQWRANSSQSQLLGSYELSKANWGWSWKERWVAARPWESRISGLSVTPEKTHHKQPSKVQKDKNTPPKTPVPVKPSLAIAKGTPPSANAKGNSKARRLSYPPTAEKTVVQGVQ 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00733 306 PANTHER IQ-DOMAIN 5-RELATED 1 271 - -
Vimu2g00733 306 ProSiteProfiles IQ motif profile. 66 94 IPR000048 GO:0005515
Vimu2g00733 306 MobiDBLite consensus disorder prediction 237 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00733 Vimu-Chr2 4464508 4467530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00733 1 294 IQD Protein Family AT2G33990 52.381 1.08e-90 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00733 - - var:108341135 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00733 2 4464508 4467530 Vimu2g00733 2 4464508 4467530 ECH
Vimu2g00733 2 4464508 4467530 Vimu11g01955 11 30418556 30421241 ECH