Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00725 ATGTTAGAAGAAGCCTATTTTATTGCATGTAAACTGAGTATTAGTGTGTTTCCATTTAACACATGTGCAGCTGAAGCAGTGGGGTATAGAAAGGTGATTCCACCGTTTCTGGACCCTAATTTGAAGCCGGAAGATCTTGAGTATGGTGTTAGTTTTGCATCAGCAGCCACAGGTTTCGATGATTACACAGCAGAAGTTTCGAATGTTTTGTCTGTTTCGAAACAATTGGAGTATTTTGCGCATTATAAGATCCACTTGAGAAGAGAGGTGGGTGAAGAAAGAGCAGAATTCATTACAAGAAATGCCTTGTATATTATCAGTATGGGTACAAATGATTTCCTCCAGAATTATTTCTTAGAACCTACACGCCCTAAGCAATTCAGCTTGGAAGAATTTGAGAATTTCTTGCTCTCTCGCTTCGCCAAGGACGTTAAGGAAATGCATAGACTTGGGGCAAGGAGGTTAATCATTGTAGGAGTCCTCCCTCTGGGATGCATTCCACTTATCAAGACACTTAGAGGTGCGGAAGGCTGTGATAAAAGTTTAAATAGTGTTGCTCATGCATTCAATGCAAAATTATTACAGCAATTAAACATCCTGAAGACAAAGCTGGGCTTAAGAACTGCTTTGGTTGATGTTTATGGCATGATCCAACGTGCAGTCACCAATCCTAAACAATATGGATTTGTCGAAGGTTCGAAAGGATGTGTTGGAACAGGGACAATAGAATATGCAGATTCATGCAAAGGGGTGAGTAGTTGTTCGGATGCAGACAAATATGTATTCTGGGATGCTGTTCATCCAACGCAGAAAATGTACAAGTTAATAGCTGAAGAGGCCATTGCATCTTTTGTTACTAATTTCTTTTGA 870 0.3989 MLEEAYFIACKLSISVFPFNTCAAEAVGYRKVIPPFLDPNLKPEDLEYGVSFASAATGFDDYTAEVSNVLSVSKQLEYFAHYKIHLRREVGEERAEFITRNALYIISMGTNDFLQNYFLEPTRPKQFSLEEFENFLLSRFAKDVKEMHRLGARRLIIVGVLPLGCIPLIKTLRGAEGCDKSLNSVAHAFNAKLLQQLNILKTKLGLRTALVDVYGMIQRAVTNPKQYGFVEGSKGCVGTGTIEYADSCKGVSSCSDADKYVFWDAVHPTQKMYKLIAEEAIASFVTNFF 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00725 289 PANTHER GDSL ESTERASE/LIPASE EXL3 23 279 - -
Vimu2g00725 289 SUPERFAMILY SGNH hydrolase 102 282 - -
Vimu2g00725 289 Gene3D SGNH hydrolase 18 286 IPR036514 -
Vimu2g00725 289 Pfam GDSL-like Lipase/Acylhydrolase 40 279 IPR001087 GO:0016788
Vimu2g00725 289 CDD SGNH_plant_lipase_like 24 281 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00725 Vimu-Chr2 4413934 4416276 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00725 19 281 Pollen Coat Proteome AT1G75910 31.227 2.34e-40 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00725 - - gmx:100819691 485.723