Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00724 ATGGGAACTTGTGATACACACTTTTATCTTTCTCTTATGCAGATTTTCATTCCATGCTTGCTATGTATCATGCCCAAAGTTGAAGCTTTAAACGTAACAATCTCAGGATTTTATGTGTTTGGAGACTCCACGGTTGATCCTGGAAACAATAACTACATCAAGACAGCTTTCAAGAGCAATTTTCCACCTTATGGATTGGATTTTTCCAACCAGGTTCCAACAGGGAGATTTACCAATGGGAAGCTTGCCACTGATTACATCGTTTCATACACGGGTCTCAAGAAAGAGCTTCTTCCACCTTATCTTGATCCAAGCCTCACCAATGTTGAAGAGCTAATGACAGGAGTCAGTTTTGCCTCTGCTGGTTCTGGCTTTGACCCACTTACACCAACCATCACTAATGTAATTTCAATAGAAAAGCAGTTGGACTATTTCAGAGAATGCAAAAAGAGGATGGAGGATGCGATGGGTAAGCAAAGAATTGAAGATCATGTGAAGAAGGCTGCGTACTTCATCAGTGCTGGTACAAATGACTTCGTTCTTAATTATTTTTCTCTACCAGTACGAAGAAAGAGCTACACTCTCCAAGCGTATCAAAACTTCTTAATCCAACGTATCACAGATTTTATACAGAATTTGTTGGCAGAAGGTGGTAGAAAGATTGTAGTAGCTGGAATACCTCCAATGGGATGTCTACCGTTGATGATCACGATGAATTCTCCCGATGCCTTATTCCAACGTGATTGCATTGACAAATACTCTTCTATTGCAAGAGACTACAATCTGCTCCTTCAACAAGAATTACGCAAAATGCAATTGCACCTTATAAATTCCTCTGCTTCCAATGCTAAGATCTATTATGTTGACATATATAAACCCATTGCGGATATGATCCAATCTCGTCACATATTTGGATTTGAAGAGGTTCACAGTGGATGCTGTGGAACTGGGTTGATTGAGGCATCAATATTGTGTAATAAGATTTCAGATGTGTGTGTTGATCCATCAAAATACGTATTCTGGGATTCAATTCACCCAACTCAGAAGGCATATCACAACATCTTCTTGGCCAGCATCTCTACCATTGAGTTCATCATCAATAACTAG 1107 0.3957 MGTCDTHFYLSLMQIFIPCLLCIMPKVEALNVTISGFYVFGDSTVDPGNNNYIKTAFKSNFPPYGLDFSNQVPTGRFTNGKLATDYIVSYTGLKKELLPPYLDPSLTNVEELMTGVSFASAGSGFDPLTPTITNVISIEKQLDYFRECKKRMEDAMGKQRIEDHVKKAAYFISAGTNDFVLNYFSLPVRRKSYTLQAYQNFLIQRITDFIQNLLAEGGRKIVVAGIPPMGCLPLMITMNSPDALFQRDCIDKYSSIARDYNLLLQQELRKMQLHLINSSASNAKIYYVDIYKPIADMIQSRHIFGFEEVHSGCCGTGLIEASILCNKISDVCVDPSKYVFWDSIHPTQKAYHNIFLASISTIEFIINN 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00724 368 CDD SGNH_plant_lipase_like 37 360 IPR035669 -
Vimu2g00724 368 Gene3D SGNH hydrolase 27 364 IPR036514 -
Vimu2g00724 368 PANTHER GDSL ESTERASE/LIPASE EXL3 29 354 - -
Vimu2g00724 368 Pfam GDSL-like Lipase/Acylhydrolase 38 355 IPR001087 GO:0016788
Vimu2g00724 368 SUPERFAMILY SGNH hydrolase 166 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00724 Vimu-Chr2 4405474 4410557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00724 8 354 Pollen Coat Proteome AT1G75930 35.244 1.83e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00724 - - gmx:100788326 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00724 2 4405474 4410557 Vimu2g00724 2 4405474 4410557 ECH