Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00702 ATGACTATTACTGAAAAGACTAGTGTCACTGACACAAAACTCACCGAGGAAATTCGAACTGTAACATGCCACTCCTGGGACCCTGGAGTGAAATTTGACCCAAGTGACCTAGAAATACTAGAGTATTTAGAGGCAAAAGTGGGGTCTGATGCACGCAAGCTTCATCCCCTTATTGAAGCGTTCATACCAACTATTGAAGGCGAGAATAGGATTTGGTCTACGGACCCAGAAAAACTACCAGAAAAATGGCTAATGATACTGGTTATGGAAGATAAACTAGTACAAAGGGAAGAAAGAGATGGACAACTGGTTATGGCTTCAGAAAAGTGGCTAACGATACTCCCCAGTGGCTAA 354 0.4266 MTITEKTSVTDTKLTEEIRTVTCHSWDPGVKFDPSDLEILEYLEAKVGSDARKLHPLIEAFIPTIEGENRIWSTDPEKLPEKWLMILVMEDKLVQREERDGQLVMASEKWLTILPSG 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00702 117 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 28 80 IPR044799 GO:0003700
Vimu2g00702 117 SUPERFAMILY NAC domain 22 83 IPR036093 GO:0003677|GO:0006355
Vimu2g00702 117 ProSiteProfiles NAC domain profile. 26 117 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00702 Vimu-Chr2 4250547 4253576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00702 7 80 NAC Transcription Factor Family AT1G28470 51.579 5.10e-21 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00702 - - gmx:100809389 93.9745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00702 2 4250547 4253576 Vimu2g00702 2 4250547 4253576 ECH