Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00663 ATGATCAGACACAAGCTGAAACACGCACACCCTCTTGCACCACTTGTAATGATTCTTCTCTGTTTCAACTCCACATGTGCCATTGATTTCGTCTTCAACGGCTTCAACTCCTCTGAAGTATTGCTCTTTGGAAACGCCACCATCGATTCTCGAATTCTAACACTAACACATCATCAAACTTTCTCCATCGGTCGTGCCTTGTACAAGGAAAAAATTCCCACCAAGAAACCAAACTCTTCTTTTGTCTACCCTTTCTCCACCTCTTTCATCTTTGCCATGGCACCTTATGAAGACACTCTTCCGGGGCATGGCTTGGTTTTCATCTTTACACCTGTCACGGGCATCCAAGGCACAAGTTCTGCACAACACCTTGGTCTGTTCAACCTCACCAACAACGGAAACTCAAGCAACCATGTGCTTGGTGTTGAGTTCGATGTGTTCATGAACCAAGAGTTCGATGACATCAACGCCAATCATGTGGGGATTGACATAAACTCTCTCAAGTCTTCTTTTTCCAATGATTCTGGATATTGGCAAGATGACGGTGACAAGTCCTTTAAGGAATTGACGCTCAACAGCGGTGAGAATTACCAAGTTTGGATTGACTACGAAGATTCTAGGATGAATGTTACCATGGCACCGGTGGGTAGGAAAAGGCCCAGTAGGCCTTTGTTGAATGTTTCTCTCAACTTATCTCAGGTTTTTGAGGATGAAATGTTTGTTGGGTTTACTAGTGCCACTGGTCAATTAGTTGAGAGTCACAAGATTTTGGGTTGGAGTTTCAGCAATGAGAATATTTCGTTGAGTGATGAACTTATTACTACCGGGTTACCGTCTTTTGTTCTTCCAAAGGACTCAATTTTTAAGTCCAAGGGGTTTGTTGCAGGTTTTACTGTTGGAGCTTTCTTAGTTATTTGTGTCTTGGTTTTGTTGGCACTGGTTTTGATCGAGAGGAAGCGTTTGAGAGAAAGGAAGAGGCAGGAAATGGAAGATTGGGAGTTGGAGTTTTGGCCACACAGAATGGTGTATGAGGAAATTGAGGCAGCAACAAAGGGGTTCTCTGAGGAGAATGTGATTGGGGTTGGTGGGAATGGGAAAGTCTACAAGGGTGTTCTAAGAGGAGGGGTGGAGATTGCTGTGAAGCGCATTTCTCATGAAAATGATGGCCTGCGAGAATTTCTTGCTGAAGTTTCAAGCCTTGGGAGACTGAAGCAAAGGAATTTGGTGGGATTGAGAGGTTGGTGCAAGAAAGATGTTGGGAGTTTCTTGTTAGTCTACGACTACATGGAAAATGGTAGCTTGGACAAGAGGGTGTTTGATTGTGATGAGAGGAAGATGTTGAGTTATGAGGATAGGATAAGGATTATCAAAGATGTGGCTTTTGCAGTTTTGTACTTGCACGAGGGGTGGGAAGCTAAGGTTCTGCATAGGGACATCAAGGCCAGCAATGTTTTGCTTGATAAGGATATGAATGGAAGGCTTGGGGATTTTGGGTTAGCCAGAATGCACAGCCATGGTCAAGTTGCTAGCACCACAAAATTGGTTGGAACAGTGGGGTACATGGCTCCCGAAGTGTTCAAGACTGGAAGAGCTTCCACTCAGACAGATGTTTACATGTTTGGGATCTTGATTTTAGAGGTTTTGTGTGGAAGGAGACCTCTAGAAGAAGGTAAGTCACCTTTGGTGGAGTGGGTTTGGCAACTGATGGTACAAGGGCAGCTTGTTTTTGCACTTGATGAAAGATTAAGGACTAAGGGAGAGTTCAGTGAGCAAGAAGTGGAGAGGTTAATGCACTTGGGTTTGCTGTGTGCCTACCCTGAACCAAAGGTCAGGCCCACAATGAGACAAGTGATGAATGTTCTGGAGGGGAAGAACGATGAAGATGATTCAGAAATTGAGAATATGGATAGTTATTTGCTCCAACAATTGAAATCAAGGGATATATTGTCTGAGTATTCCCAATACTTTAATTATGTCTCACACCCAACTTTTCAAGATATTGGTAACTCTTCCTCAATGTCTCTCACTTGGTCCGAATCTGTAGTTGAGGGTAGGTGA 2058 0.4368 MIRHKLKHAHPLAPLVMILLCFNSTCAIDFVFNGFNSSEVLLFGNATIDSRILTLTHHQTFSIGRALYKEKIPTKKPNSSFVYPFSTSFIFAMAPYEDTLPGHGLVFIFTPVTGIQGTSSAQHLGLFNLTNNGNSSNHVLGVEFDVFMNQEFDDINANHVGIDINSLKSSFSNDSGYWQDDGDKSFKELTLNSGENYQVWIDYEDSRMNVTMAPVGRKRPSRPLLNVSLNLSQVFEDEMFVGFTSATGQLVESHKILGWSFSNENISLSDELITTGLPSFVLPKDSIFKSKGFVAGFTVGAFLVICVLVLLALVLIERKRLRERKRQEMEDWELEFWPHRMVYEEIEAATKGFSEENVIGVGGNGKVYKGVLRGGVEIAVKRISHENDGLREFLAEVSSLGRLKQRNLVGLRGWCKKDVGSFLLVYDYMENGSLDKRVFDCDERKMLSYEDRIRIIKDVAFAVLYLHEGWEAKVLHRDIKASNVLLDKDMNGRLGDFGLARMHSHGQVASTTKLVGTVGYMAPEVFKTGRASTQTDVYMFGILILEVLCGRRPLEEGKSPLVEWVWQLMVQGQLVFALDERLRTKGEFSEQEVERLMHLGLLCAYPEPKVRPTMRQVMNVLEGKNDEDDSEIENMDSYLLQQLKSRDILSEYSQYFNYVSHPTFQDIGNSSSMSLTWSESVVEGR 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00663 685 Gene3D - 26 272 - -
Vimu2g00663 685 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 315 428 - -
Vimu2g00663 685 Gene3D Phosphorylase Kinase; domain 1 314 428 - -
Vimu2g00663 685 Pfam Legume lectin domain 28 266 IPR001220 GO:0030246
Vimu2g00663 685 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Vimu2g00663 685 SUPERFAMILY Protein kinase-like (PK-like) 329 624 IPR011009 -
Vimu2g00663 685 CDD STKc_IRAK 359 623 - -
Vimu2g00663 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Vimu2g00663 685 ProSiteProfiles Protein kinase domain profile. 353 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu2g00663 685 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 270 IPR013320 -
Vimu2g00663 685 PANTHER - 46 625 - -
Vimu2g00663 685 Gene3D Transferase(Phosphotransferase) domain 1 429 646 - -
Vimu2g00663 685 FunFam L-type lectin-domain containing receptor kinase S.4 26 269 - -
Vimu2g00663 685 FunFam L-type lectin-domain containing receptor kinase S.4 429 634 - -
Vimu2g00663 685 CDD lectin_legume_LecRK_Arcelin_ConA 28 262 IPR001220 GO:0030246
Vimu2g00663 685 Pfam Protein kinase domain 354 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu2g00663 685 SMART serkin_6 353 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00663 Vimu-Chr2 3935577 3937634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00663 23 569 Receptor kinase-like Gene Family AT4G04960 69.022 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vimu2g00663 Pkinase 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00663 - - gmx:100804391 1201.04