Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00571 ATGTCTAGCAAAAAGGTGGATGTACAATTCAGTGAAGCCGAATGTTTCAAGATTGATGCAGAAAATAAGAAAATTTACTGCCGATCAAGTTTGAACAATAATTTGAATGGAAAAGAAGAATTCGCGGTGGATTATGACTACTTAATAATCGGCGTGGGCGCTAATGTCAACACATTTAATACTCCAGGAGTTATGGAGAATTGCCATTTTTTGAAGATTAGAAGAACAGTTATTGACTGCTTCGAGAGAGCAAATTTGCCCGATGTAAGTGAAGATGAGAAGAAGAGAATTCTGCATTTTGCTATTGTTGGAGGTGGACCAACTGGAGTGGAGTTTGCAGCCTCACTTCATGATTTTGTCAATGAGGATTTGGTCCGTTTGTATCCTGGGATAAAAGATTTGGTTAAAATTACTCTTCTGGAGGCCGCAGATCATATTTTGGGCATGTTTGACAAGAGAATCACTGCTTTTGCTGAAGACAAGTTTCGAAGAGATGGGATTGATGTGAAAACAGGATCCATGGTTGTTAAGGTATCTGAGAAAGAAATTTCCACCAAAGAACTGAAAAGTGGAGGAGAGATTAAGACAATACCGTATGGAATGGCAGTCTGGTCAACTGGTATCGGTACTCGTCCATTTATTAAAGATTTTATGACTCAAATCGGCCAGGTGTGTTATTGA 681 0.3891 MSSKKVDVQFSEAECFKIDAENKKIYCRSSLNNNLNGKEEFAVDYDYLIIGVGANVNTFNTPGVMENCHFLKIRRTVIDCFERANLPDVSEDEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLVRLYPGIKDLVKITLLEAADHILGMFDKRITAFAEDKFRRDGIDVKTGSMVVKVSEKEISTKELKSGGEIKTIPYGMAVWSTGIGTRPFIKDFMTQIGQVCY 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00571 226 SUPERFAMILY FAD/NAD(P)-binding domain 42 207 IPR036188 -
Vimu2g00571 226 Gene3D - 1 224 - -
Vimu2g00571 226 PANTHER NADH DEHYDROGENASE 4 223 IPR045024 GO:0003954|GO:0006116
Vimu2g00571 226 Pfam Pyridine nucleotide-disulphide oxidoreductase 6 215 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00571 Vimu-Chr2 3322389 3328135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00571 1 223 Chloroplast and Mitochondria Gene Families AT4G21490 69.130 5.28e-101 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00571 K03885 - gmx:100802661 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03505 11 56489817 56494446 Vimu2g00571 2 3322389 3328135 PCT