Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00559 TGGAATGATTTGAAAATATATATACAGGGTGGATTGCTTCTGGGTCCATCAGTGCTTGGAAGAAATAAAAATTTTGCCAATATTGTGTTCCCTATGAAAAGTGTAATGCTGGTGGAGACAATGGCAAACATGGGTCTGATATACTTTGTGTTCCTGATTGGGTTAGAGATGGACGTTTCGATCATCAAACGTGCTGGAAAGAAGGCAGTGTTAATTTCCCTTGCTGGTATGGTGATTCCCTTTATGGTTGCTATTTGTTTATCCTCTTTAATAGCTAACACAGACGAAACCATAAATCAAGCCAGTTATATCCTCTATCTTGGTATTGTTCTATCTGTCACTGCATTCCCGGTGCTTGCTCGAATGCTTGTTGAGCTCAAACTTATCAACACAGACTTAGGGAAGCTTGCTCTATCAACTTCTCTCATCAATGATGTGTGTGCATGGATGTTGTTGGCTCTAACTATTGCTTTATCAGAGGAAATAATTAGCGCTTGGGTATCATTGTGGGTTCTGCTATCAAACATTGTTTTTCTTTCTTTCTCCTTTCTTATTGTTAGACCAACAATGTCGTGGTTGATAGAGAAAACTCCAGAGGGAAAACCCTTCAGTGATTTTCAATTATGCATTGTGCTCACTGGTGTATTGATGTCGGCCTTCATCACGGATGTCCTTGGAACACATTGTGTTTTTGGAGCTTTTGTGTATGGCCTAGTTATTCCAAATGGGCCACTTGGAGCTGCAATAATAGAAAAGCTTGAAGACTTTGTTTCAGGACTTTTGCTTCCTCTCTTTTATGCCATCAGTGGGCTTAAGACAGATATCAGCTTAATCAGTGGAGCTAATACTTGGACTTTTATTCTCTCAGCGATTTCTCTGACTTATCTCGGCAAGATTGCTGGGACTCTCCTTGTTTCAAACATTTTGCAGATACCAAATCGTGATGGAGTTGTTCTTGGTTTACTTATGAACGCTAAAGGCATTATTGAAATTATTGTGCTCAATGTTGGGAGGGAACAAAAGATCTTGGATGATAGAATATTTTCAGTCATGATCATTGTAATACTGATAATGACAGCATTCATTTCACCAATTGTAAAATTAATTTATAGGCCAAGAAAAATGCTTGCACCTTATAAAAGGAGAACAATACAAAGTTCAAGACTTGATGGAGAGTTAAGAGTTCTTGTGGGTATTCACACCCCTCGAAATGTTCCCACTCTAGTTAATCTCCTTGAAGCAACTTATCCCAATAAAAGGTCTCCAATGTGTGCTTATGTGCTCCACTTGGTTGAACTCACTCGTAGAGCTTCTGCAATGCTAATTGTCCATGCCAATAGACAATCAGGAGGTCCAGCCCTCAACAAAACACAAGCACAAACCGACCACATCATCACGGCATTTCATAACTTTGAGGAACAGGTCAATTACGCTCAAGTCCAACCCTTAACAGCCATTTCCTCTTACTCCACCATGCATGAAGACATATGCAATTTGGCTGAGGAGAAAAGGGTGTCCATCATCATCATTCCTTTCCATAAGCAACAAACAGTAGACGGACAAATGGAAGATACAATCCCAGCATTAAGAATGGTGAACCACAATCTACTACAAAACTCACCATGCTCGGTTGGTATACTTGTGGATAGGGGATTTAATGGATCCAACCGCTTGATTGGAAATCAAGCATGTCATAAAGTGGCTGTGCTATATTTTGGAGGACCAGATGACAGAGAGGCATTAGCTTATGGATGGAGAATGTCAAGACATCCAAGGGTTCACCTTACTGTCATGCACTTCATTCCAACGGAGTATTCATATCAAAGTTCAGAAACAGATCGCTTATGGGCAAAGATTGATCGAAGTTTCACCACTATAAAAAATGGGGGGGAAAACCAACTGGATAATGAGTATATAAGTGAGTTCAAGAATATGATTGCACATGATGATTCAGTCATTTACATGGACAAGGTTGTGAACAATGGGGAGGAAACAGTTGCAGCAATAAGATCAATCAATAACGTGAATGACTTGTTCATAGTTGGGAGAGGACAAGGGACAATGTCACCACTAACAGATGGCCTTACAGATTGGAGTGAGTGTCCTGAGTTAGGAGCCATTGGGGATTTACTAGCCTCTTCAGATTTTGAAACAACGGCTTCGGTGTTGGTGATGCATCAATATGTAGGGCAAGGACCAGATGGAGAGGACAATTTTGTAGTTGAAAGACCATGGGAATCAGCTGAATCCCGACATAGCATAAATCAACAACAACATATGCAAAGATATGTAATGCCAATGGGAACAGGACACTCTTCTGTAATGTTTACGGTACCATGA 2340 0.403 WNDLKIYIQGGLLLGPSVLGRNKNFANIVFPMKSVMLVETMANMGLIYFVFLIGLEMDVSIIKRAGKKAVLISLAGMVIPFMVAICLSSLIANTDETINQASYILYLGIVLSVTAFPVLARMLVELKLINTDLGKLALSTSLINDVCAWMLLALTIALSEEIISAWVSLWVLLSNIVFLSFSFLIVRPTMSWLIEKTPEGKPFSDFQLCIVLTGVLMSAFITDVLGTHCVFGAFVYGLVIPNGPLGAAIIEKLEDFVSGLLLPLFYAISGLKTDISLISGANTWTFILSAISLTYLGKIAGTLLVSNILQIPNRDGVVLGLLMNAKGIIEIIVLNVGREQKILDDRIFSVMIIVILIMTAFISPIVKLIYRPRKMLAPYKRRTIQSSRLDGELRVLVGIHTPRNVPTLVNLLEATYPNKRSPMCAYVLHLVELTRRASAMLIVHANRQSGGPALNKTQAQTDHIITAFHNFEEQVNYAQVQPLTAISSYSTMHEDICNLAEEKRVSIIIIPFHKQQTVDGQMEDTIPALRMVNHNLLQNSPCSVGILVDRGFNGSNRLIGNQACHKVAVLYFGGPDDREALAYGWRMSRHPRVHLTVMHFIPTEYSYQSSETDRLWAKIDRSFTTIKNGGENQLDNEYISEFKNMIAHDDSVIYMDKVVNNGEETVAAIRSINNVNDLFIVGRGQGTMSPLTDGLTDWSECPELGAIGDLLASSDFETTASVLVMHQYVGQGPDGEDNFVVERPWESAESRHSINQQQHMQRYVMPMGTGHSSVMFTVP 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00559 779 Gene3D - 4 376 IPR038770 -
Vimu2g00559 779 PANTHER CATION/H + ANTIPORTER 8 729 - -
Vimu2g00559 779 Pfam Sodium/hydrogen exchanger family 7 366 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vimu2g00559 779 Gene3D - 420 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00559 Vimu-Chr2 3241996 3244420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00559 8 751 Antiporter Super Family AT2G13620 58.871 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00559 K26731 - gmx:100800514 1259.59