Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00481 ATGGGTGAAGAACTTACGGGTTTGGGTATCAAAGAACTACAAAATCTGGAAAACCAACTGGAGATGAGTCTAAAGGGTGTTCGCATGAAAAAGGATCAAATTTTAACAAGTGAGATTAAAGAACTGCGTCAAAAGGGAAATCTCATTCATCAGGACAATGTTGAACTCTATCAAAAAATGGACCAGATTCAAAAGGAAAATGCAGAGCTACAGAAGAAGGTTTATGGAAGCAGGAGTACAGGTGAAGAAAATGTGGCATCCAGTCCTTCTTACATGGTCAGAAATGAATATGATTTACGTCCACCAATCAGTCTCCAGCTAAGTCAGCCACAGACTCACTACAGTGAACCATCAGCCAAAATTGCAGCTGCATTAGCAAAAAATTGTTCAGTAAATGGGGAGTTGTCATTTTGTGACAAGAAGCAACTATGTTACAACTTCTGCCTAGAATGGTCAGACTTTCTACTAGTTGGGTCTTGTAGTTCCTCAACCGCATTTGTTCCATTCAACTTTACAATGCATGTATGGTATACGAGATTATCTATCAAGAAGCTTATGATTTCTGTTAAGGATTAG 576 0.3872 MGEELTGLGIKELQNLENQLEMSLKGVRMKKDQILTSEIKELRQKGNLIHQDNVELYQKMDQIQKENAELQKKVYGSRSTGEENVASSPSYMVRNEYDLRPPISLQLSQPQTHYSEPSAKIAAALAKNCSVNGELSFCDKKQLCYNFCLEWSDFLLVGSCSSSTAFVPFNFTMHVWYTRLSIKKLMISVKD 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00481 191 Pfam K-box region 1 60 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vimu2g00481 191 Coils Coil 10 30 - -
Vimu2g00481 191 ProSiteProfiles K-box domain profile. 1 66 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vimu2g00481 191 Coils Coil 53 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00481 Vimu-Chr2 2744651 2745748 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00481 2 118 MADS-box Gene Family AT2G22630 50.847 8.37e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00481 K09264 - gmx:100808145 204.527