Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00447 ATGGTGTGCCAAGCAGCGAGCCAAACAAGATTTCGGGCTTTGAAACATGAGAATGGCATTGAAGGTGAACCGACAATTATTGTTAGAGTGATAGCATGCTTTCAACCTTTGCACGATTGTCAGAGAGGCAGCAAGTCATTGAAAAACCCATATCAAGACGCCATAACATCTACTGGTCATATCTTTCGTTGGATGGTTAAGGCTCATAGGTCTTGGCCTTACCCACAGCACGTGGCTTGGCCATCACCTTACTTTAATAGCCCTTGCACCTCAGCAGAGCCCAGTTCGCTGGTTCGTTCAACATACATGAACTCTAGCACTTGCATCTTTCCTGCTGTCAGCATATTTCCCGGGTTCACAGCTCCTGCTATCCCAGATTTGAAGAGTGAGCAGACCAAGGAAGTGCAAGGATTCCTTCAGCGTCCCAGTTTGGAACCATGTTTGAACGGAACAAATACTGGAGAGGCTATGCAAAATGCAACTTTGCAGAAGAAGTTGCTTGTGTTTGACCACTCTGGTAGTAAGACAAGGTTGCTTTATAGTCCTGTCTTCCCTTTTGTCCAGAGTCCAATTGTTACCGCTACCCAATTTACTCAAGTTTATGATGTAAACGAAGAAACACGGGCAACTAATATAGGTCTAAAGCATTGGCCAGTGTACACTTCATCAAAAGAGACTGGTAAGGATCGTGTAGATAATGAAGAAAGTGAAATGCATGAAGACACAGAAGAAATCAATGCATTGCTTTATTCTGATGATTCTTATGATGATGATGATGATGGTGATGATGATGAGGTAACTAGTACAGGTCATTCTCCGTTGGTTACTGAAAAAACTTGTGTGATTCAAGAACAGTTTGTGGATATGAAGGAGGAAGTTGTTAGCACTGATTGGCCAAACAAAAGGCAGAAGTTAATTGATGGTGGATTCAATAGATTACCACCACTTGTGGAGAGTGCTAGTTCCGAAAGGCTAGATAAAATGTGTGAGTATGCCAGTGATGTTGAATCAAACTGTTCTAGTAGTGGTGGGGTGTATGCTACAAGGCAAACTAAAGAGAAATCAACAGCTGCCGATATTCAATTGAAAAAGGATAAAATCCGTAAACTGGTGAGAGTTCTTGAGAACTTTATTCCAGGAGCAAAAGGAAAGCACCCCCTATTAGTCATCGATGGTACAATTGAGTACTTGGAATCTCTGATGTCCCAAACTGGTACACTGAAATATAACTAA 1233 0.4201 MVCQAASQTRFRALKHENGIEGEPTIIVRVIACFQPLHDCQRGSKSLKNPYQDAITSTGHIFRWMVKAHRSWPYPQHVAWPSPYFNSPCTSAEPSSLVRSTYMNSSTCIFPAVSIFPGFTAPAIPDLKSEQTKEVQGFLQRPSLEPCLNGTNTGEAMQNATLQKKLLVFDHSGSKTRLLYSPVFPFVQSPIVTATQFTQVYDVNEETRATNIGLKHWPVYTSSKETGKDRVDNEESEMHEDTEEINALLYSDDSYDDDDDGDDDEVTSTGHSPLVTEKTCVIQEQFVDMKEEVVSTDWPNKRQKLIDGGFNRLPPLVESASSERLDKMCEYASDVESNCSSSGGVYATRQTKEKSTAADIQLKKDKIRKLVRVLENFIPGAKGKHPLLVIDGTIEYLESLMSQTGTLKYN 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00447 410 PANTHER TRANSCRIPTION FACTOR BHLH145 72 408 IPR037546 -
Vimu2g00447 410 MobiDBLite consensus disorder prediction 251 274 - -
Vimu2g00447 410 MobiDBLite consensus disorder prediction 251 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00447 Vimu-Chr2 2549880 2551508 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00447 147 400 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 36.567 3.83e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00447 - - gmx:100778385 511.916