Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00395 ATGGAGCCACGTAGTTTCTACTCTCTGCTGTTTCTTTTGCTTGCTTTAGCTTCTGTAAACTCAGTGCATGGCCAAGGAACACGTCAAGGGTTTTATTCTAGTTCGTGTCCTCGTGTCGAGTCCATTGTTAAGTCCACAGTTCAATCCCACGTTAAGTCTGATCCTACTTTGGCTGCTGGCTTGCTTCGGATGCACTTCCATGATTGCTTTGTGCAAGGTTGTGACGGTTCTGTTCTCATTTCCGGTGCTAACACTGAGAGAACAAACTTTGCTAACCTTGGTTTACGAGGATTTGAGGTTATCGATGATGCAAAGACACAACTCGAGGCTGCATGCCCCGGTGTTGTGTCTTGTGCTGATATCCTTGCCCTTGCTGCTCGTGACTCCGTTGTTCTGGTAATTAATTAA 408 0.4608 MEPRSFYSLLFLLLALASVNSVHGQGTRQGFYSSSCPRVESIVKSTVQSHVKSDPTLAAGLLRMHFHDCFVQGCDGSVLISGANTERTNFANLGLRGFEVIDDAKTQLEAACPGVVSCADILALAARDSVVLVIN 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00395 135 FunFam Peroxidase 30 135 - -
Vimu2g00395 135 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Vimu2g00395 135 SUPERFAMILY Heme-dependent peroxidases 28 132 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu2g00395 135 ProSiteProfiles Plant heme peroxidase family profile. 26 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g00395 135 PANTHER PEROXIDASE 25-RELATED 14 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g00395 135 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g00395 135 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g00395 135 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g00395 135 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g00395 135 Pfam Peroxidase 43 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g00395 135 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g00395 135 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g00395 135 Gene3D - 28 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00395 Vimu-Chr2 2244655 2245062 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00395 8 133 Peroxidase AT5G39580 69.048 4.45e-59 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00395 K00430 - gmx:100820620 211.46