Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00394 ATGCACTATGATTTGACATTATACAACTTCACTGCAAATGGTCCTGATCCTTCCATCGACCCTTCATTTATTTCCCAACTACAATCGCTATGCCCACAAAACGGTGACGGTTCAAACCGCGTTGCCCTAGACACGGGTAGTCAAAGAGCATTTGATTTATCTTACTATAATAATTTGAGGAGAGGACGTGGAATTCTGCAGTCTGATCAAGCCCTCTGGAACGATGATTCCACTCAGAAAATTGTGCAGGGGTACTTGGGCTTAATAAGAGGGTTGCTTGGATTGAAATTCAACGTGGAGTTTGGAAAATCTATGGTGAAGATGGGAAACATTGAGTTGAAAACTGGCACTGATGGTGAAATTCGCAAGATTTGTTCTGCCATCAACTAG 390 0.4231 MHYDLTLYNFTANGPDPSIDPSFISQLQSLCPQNGDGSNRVALDTGSQRAFDLSYYNNLRRGRGILQSDQALWNDDSTQKIVQGYLGLIRGLLGLKFNVEFGKSMVKMGNIELKTGTDGEIRKICSAIN 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00394 129 Gene3D - 109 129 - -
Vimu2g00394 129 Gene3D Peroxidase, domain 2 7 108 - -
Vimu2g00394 129 ProSiteProfiles Plant heme peroxidase family profile. 7 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g00394 129 SUPERFAMILY Heme-dependent peroxidases 8 129 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu2g00394 129 Pfam Peroxidase 10 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g00394 129 PRINTS Plant peroxidase signature 58 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g00394 129 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g00394 129 PRINTS Plant peroxidase signature 42 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g00394 129 PANTHER - 7 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00394 Vimu-Chr2 2243770 2244644 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00394 1 129 Peroxidase AT2G41480 54.615 2.34e-49 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00394 K00430 - gmx:100820620 214.542