Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00386 ATGAGTCAACGCGTGAGTGACGAGGGTGTGAGAAAGGGCATGGAGGAAATAAAAAGTGGGGCATCTTCACGTAGGCATGGAGATACTTTGTCACACATTCACAGAGTGGAATCTCCTCCTAAGCAGACACTTTTCAAAGAGATCAAAGATTCTGTGGTTGAGACTTTCTTCCCAGACAAACCCTTAAACAAATTTAAAGACCAGAGCTTCTTTAGAATCTTTGTATTAGCCCTGCAATCTTTCTTCCCCATTTTCAAATGGGGCAGAGACTACAATCTTAAAAACTTCAGAGGTGATTTCATTTCTGGACTCACCATTGCAAGTCTTTGCATCCCTCAAGACATTGCATACGCAAAACTTGCAAATTTGGATCCCCAATATGCACTGTGTGAGCGTCTTGGTTTTGTTTTAAGAATTCAACTCGGAGATCTTAACACTAGTTTTGTTACCCCTCTTGTATATGCTTTCATGGGAAGCTCAAGAGATATTGCCATTGGACCCGTAGCTGTTGTGTCCCTCTTGCTTGGGACTACACTGTCCGATGAAATCAGCGACATCAAAAGTCACGAATACCTGCGCCTTGCATTTACTGCCACCTTCTTCGCAGGAGTCATTCAAATGGCACTTGGTGTTCTCAGACTTGGTTTCTTGATTGACTTTGTGTCACATGCTGCCGTTGTGGGATTCATGACTGGATCTGCCATTACAATTGCACTGCAACAGCTTAAGGGTTTGCTTGGCATAGAAACTTTCACTAAGAAAACTGATATTGTTTCTGTCATGCGCTCCGTATTCAGTTCAGCACACCATGGGTGGAATTGGGAGACAATAGTCATTGGATTATCATTCTTGGTTTTCCTTCTTCTAGCCAAGTATATCGTTAAAAAGAATAAGAAGCTCTTTTGGGTGGCTGCAATTTCCCCTATGATATCTGTCATAGTGTCTACCTTTTCTGTCTACATAACCAGAGCAGACAAGAAAGGCGTGGAAATTATTAAACATGTCAAGAAGGGTGTGAATTCATCATCTGCTGGAGAGATTTTTTTCAGTGGAAAATATCTAGGTCCTGGTATTCGTGTTGGTGTAATAGCTGGTATGGTAGCACTCACGGAAGCTGTAGCGATTGGGAGAACATTTGCTGCCATGAAAGACTACCCACTTGATGGCAACCAAGAAATGATGGCAATGGGAGCAATGAACATCGTTGGTTCTTTAACATCTTGTTATGTGTCTACAGGCGGATTTTCTCGCACAGCAGTGAACAACATGGCCGGTTGTAAAACTGCAGTATCGAACATAGTTATGTCCATGGTTGTGTTATTGACTCTGCTACTTATTACGCCGCTATTCGAGTACACTCCAAATGCGGTGCTTGCTTCTATTATAATAGCCGCGGTGCTTGGCCTTGTGAACATTGAAGCTATTATTCTTTTATGGAAGATAGACAAGTTCGATTTTGTTGCTTGCATGGGAGCCCTCTTTGGTGTGGTGTTCATAAATGTTGAGATTGGCCTTCTAATTGCGGTGGCTATATCTTTTTCCAAAATCCTTTTACAAGTGACAAGACCAAGGACAGCAATATTAGGGAAGCTTCCAGGAACTACTGCTTATAGGAACGTCTGGCAATATCCCAAAGCAACCCAAATTGATGGCATGCTGATTGTCAGGGTGGACTCTGCAATCTACTTCTCAAACTCCAACTATATCAAGGAGAGAATTTTGAGATGGCTGAGTGATGAAGAAACCCAAAGGATAACAAGTGGATTGTCCAGAATAGAGTATCTCACTGTTGAGATGTCACCTGTTACTGATCTTGACACAAGTGGCATTCATGCTTTTGAAGAGTTATACAGGAGTCTTCAGAAAAGAAAAGTGCAGCTTATCATGGCAAACCCAGGACCAATTGTGATAGAGAAACTCCGTGCATCTAAGTTAACAGATGTCATTGGAGAAAATAACATATTTCCAACAGTGGCTGATGTTGTTTCAACTTTTGTTGCAAATGGTGAAGGAGTATTATGA 2022 0.4179 MSQRVSDEGVRKGMEEIKSGASSRRHGDTLSHIHRVESPPKQTLFKEIKDSVVETFFPDKPLNKFKDQSFFRIFVLALQSFFPIFKWGRDYNLKNFRGDFISGLTIASLCIPQDIAYAKLANLDPQYALCERLGFVLRIQLGDLNTSFVTPLVYAFMGSSRDIAIGPVAVVSLLLGTTLSDEISDIKSHEYLRLAFTATFFAGVIQMALGVLRLGFLIDFVSHAAVVGFMTGSAITIALQQLKGLLGIETFTKKTDIVSVMRSVFSSAHHGWNWETIVIGLSFLVFLLLAKYIVKKNKKLFWVAAISPMISVIVSTFSVYITRADKKGVEIIKHVKKGVNSSSAGEIFFSGKYLGPGIRVGVIAGMVALTEAVAIGRTFAAMKDYPLDGNQEMMAMGAMNIVGSLTSCYVSTGGFSRTAVNNMAGCKTAVSNIVMSMVVLLTLLLITPLFEYTPNAVLASIIIAAVLGLVNIEAIILLWKIDKFDFVACMGALFGVVFINVEIGLLIAVAISFSKILLQVTRPRTAILGKLPGTTAYRNVWQYPKATQIDGMLIVRVDSAIYFSNSNYIKERILRWLSDEETQRITSGLSRIEYLTVEMSPVTDLDTSGIHAFEELYRSLQKRKVQLIMANPGPIVIEKLRASKLTDVIGENNIFPTVADVVSTFVANGEGVL 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00386 673 PANTHER SULFATE TRANSPORTER 57 664 IPR001902 GO:0016020|GO:0055085
Vimu2g00386 673 MobiDBLite consensus disorder prediction 8 30 - -
Vimu2g00386 673 Pfam STAS domain 543 660 IPR002645 -
Vimu2g00386 673 ProSiteProfiles STAS domain profile. 542 665 IPR002645 -
Vimu2g00386 673 SUPERFAMILY SpoIIaa-like 543 663 IPR036513 -
Vimu2g00386 673 CDD STAS_SulP_like_sulfate_transporter 543 658 - -
Vimu2g00386 673 MobiDBLite consensus disorder prediction 1 30 - -
Vimu2g00386 673 FunFam Sulfate transporter 31 522 668 - -
Vimu2g00386 673 Pfam Sulfate permease family 96 490 IPR011547 GO:0016020
Vimu2g00386 673 NCBIfam sulfate permease 83 660 IPR001902 GO:0016020|GO:0055085
Vimu2g00386 673 Gene3D STAS domain 522 666 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00386 Vimu-Chr2 2207165 2210572 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00386 1 664 Inorganic Solute Cotransporters AT1G22150 66.317 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00386 K17470 - gmx:100784124 1059.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00386 2 2207165 2210572 Vimu2g00386 2 2207165 2210572 ECH