Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00385 ATGAGTCAGCGTGTGGGTGACGAGGCTGTGACAAAAGCCATGGGAGAAATAAGAAGTGGACCATCTTCACGCAGACATGGAGATACTCTGCCACACATTCATAGGGTGGGATCTCCTCCTAAGCAGACACTTTTCAAAGAGATCAAAGATTCTGTGGCTGAGACTTTCTTCCCAGACAAACCCTTAAACAATTTTAAAGGCAAGAGCTTCTTTGGAATCTTTGTATTAGCCCTGCAGTCTCTCTTCCCCATTTTAGAATGGGGAAGAGATTACAATCTTAAAAAATTCAGAGGTGATTTGATTTCTGGACTCACTATTGCAAGTCTCTGCATCCCTCAGGACATTGCATACGCAAAGCTTGCTCATTTGGATCCACAATATGCACTATACACAAGTTTTGTGGCTCCTCTTGTGTATGCTTTCATGGGAAGCTCCAGAGACATTGCAATTGGACCAGTAGCGGTTGTGTCCCTCTTGCTTGGGACAACGCTGTCGGATGAGATCAGCAACATCAAAAGTCATGAATACCTGCGTCTTGCATTTACTGCCACCTTCTTTGCAGGAGTCACTCAAATGTTACTAGGTGTTCTCAGGCTTGGTTTCTTGATTGACTTTTTGTCTCATGCTGCCATCGTGGGATTCATGGCTGGAGCTGCCATTACAATTGCACTGCAACAGCTTAAGGGTTTTCTTGGCATAAAAAACTTCACTACGAAAACTGATATTGTTTCTGTCATGCGCTCAGTGTTTCAAGCAGCACACCACGGGTGGAATTGGGAGACAATAGTCATTGGATTAGCATTCTTGATTTTCCTTCTTGTAACCAAGTACATCGCGAAAAGGAATAAGAAACTCTTTTGGGTGGCTGCAATTTCTCCTATGATATCTGTCATAGTGTCTACCTTTTTTGTCTACATTACCAGGGCAGACAAGAAAGGAGTGGCAATTGTGAGACATGTTAAGAAGGGTGTGAATCAATCATCTGCCAGCGAGATATTTTTCAGCGGAAAATACCTAGGCGCCGGTATTCGGATCGGTGTGATATCTGGCATGGTAGCTCTCACGGAAGCCGTAGCAATTGGGAGAACATTTGCTGCCATGAAAGACTATGCACTGGATGGTAACAAAGAAATGATGGCAATGGGAGCAATGAACATGGTTGGTTCTCTAACATCTTGCTATGTGGCAACAGGCTCATTTTCTCGCTCAGCAGTGAACCACATGGCCGGTTGTAAAACTGCAGTATCGAACATCGTTATGTCGATAGTTGTGTTGTTGACTCTGCTACTCATTACGCCGCTCTTTAAGTACACTCCAAATGCGGTGCTTGCTTCTATTATAATAGCTGCGGTGCTTAGCCTTATCAACATTAAAGCTATGATTCTTTTATGGAAGATTGACAAGTTCGATTTTGTTGCTTGCATGGGAGCCTTGTTTGGTGTGATCTTCAAAAGTGTCGAGATTGGCCTTCTAATCGCGGTGGCCATATCTTTTGCCAAAATTCTCGTACAAGTGACAAGGCCAAGGGTTGCAGTACTAGGGAAGCTTTCAGGAACTACAGTTTATAGGAACGTCCAGCAATACCCCAAAGCAGCCCAGATTAATGGCATGCTCATTGTCAGGGTTGACTCCGCTATCTACTTCTCAAACTCCAACTACATCAAGGAGAGAATTTTGAGATGGCTGAGCGAAGAAGAAGTCCAAAGGACAGCAAGTGGATTATCCGGAATAGAATATCTCATTGTGGAGATGTCACCTGTTACTGATATTGACACAAGTGGCATCCATGCCTTTGAAGAGTTATACAAGAGTCTCCAGAAAAGAAAAATCCAGCTTATCTTGGCAAACCCAGGACCAATTGTAATAGAGAAGCTCCATGCATCAAAGTTAACAGACGTAATCGGAGAAGATAAAATATTTCTAACAGTGGCTGATGCTGTTTCAACCTTTGGTCCAAATGAAGTATGA 1968 0.4329 MSQRVGDEAVTKAMGEIRSGPSSRRHGDTLPHIHRVGSPPKQTLFKEIKDSVAETFFPDKPLNNFKGKSFFGIFVLALQSLFPILEWGRDYNLKKFRGDLISGLTIASLCIPQDIAYAKLAHLDPQYALYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTTLSDEISNIKSHEYLRLAFTATFFAGVTQMLLGVLRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGFLGIKNFTTKTDIVSVMRSVFQAAHHGWNWETIVIGLAFLIFLLVTKYIAKRNKKLFWVAAISPMISVIVSTFFVYITRADKKGVAIVRHVKKGVNQSSASEIFFSGKYLGAGIRIGVISGMVALTEAVAIGRTFAAMKDYALDGNKEMMAMGAMNMVGSLTSCYVATGSFSRSAVNHMAGCKTAVSNIVMSIVVLLTLLLITPLFKYTPNAVLASIIIAAVLSLINIKAMILLWKIDKFDFVACMGALFGVIFKSVEIGLLIAVAISFAKILVQVTRPRVAVLGKLSGTTVYRNVQQYPKAAQINGMLIVRVDSAIYFSNSNYIKERILRWLSEEEVQRTASGLSGIEYLIVEMSPVTDIDTSGIHAFEELYKSLQKRKIQLILANPGPIVIEKLHASKLTDVIGEDKIFLTVADAVSTFGPNEV 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00385 655 Pfam STAS domain 528 646 IPR002645 -
Vimu2g00385 655 MobiDBLite consensus disorder prediction 1 33 - -
Vimu2g00385 655 Pfam Sulfate permease family 96 475 IPR011547 GO:0016020
Vimu2g00385 655 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Vimu2g00385 655 PANTHER SULFATE TRANSPORTER 45 649 IPR001902 GO:0016020|GO:0055085
Vimu2g00385 655 FunFam Sulfate transporter 31 507 653 - -
Vimu2g00385 655 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Vimu2g00385 655 Gene3D STAS domain 507 651 IPR036513 -
Vimu2g00385 655 NCBIfam sulfate permease 83 646 IPR001902 GO:0016020|GO:0055085
Vimu2g00385 655 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00385 Vimu-Chr2 2201191 2204325 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00385 22 652 Inorganic Solute Cotransporters AT1G22150 71.677 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00385 K17470 - gmx:100784124 1104.74