Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00375 ATGTATTCCACACATTCACCAACTTTCCCAAAGAAATTAATCGTTACATTTCACTTTGGAAGTCTTCATTTCGTCACAAAAATGGAGGGACGAAGTTTAAACTCTCTAATGTTTACTTTGCTTGGTTTGACTATTGTGAACACAGTAGGAGTTAGTGGGCAAGAGACAAGTGTGGGGTTCTATTCCCGCACGTGTCCCCGCGCTGAGTCCATCGTTAAGTCCACTGTTCGAGACCATCTTAAGTCGGATCCTAGTTTGGCAGCAGGGTTGCTTCGGTTGCACTTCCATGATTGCTTCGTGCAAGGTTGTGATGCTTCCGTTCTCATCGAGGGTCCTCAAACTGAGAGAACAGCATTGCCAAACCTTAGTTTAAAAGGATTTGAGGTTATTAATGATGCTAAGACACAGCTCGAGGCTGTATGCCCCGGCGTTGTGTCATGTGCTGACATTCTTGCTCTTGCAACTCGTGATTCTGTCGACCTTAGTGATGGACTGAGTTGGAAAGTGCCTACTGGACGTAGAGATGGACGCATATCACAGGCTTCAGAAGCGAATAACTTGCCTTCTCCTTTCGACTCTGTTGCTATTCTGACGCAGAAGTTTGCAGCAAAGGGTCTCAACACGCAAGACCTCGTCGTCCTTTCTGGTGGACATACAATTGGTACAACAGCTTGCCTATTCTTCAGGCACAGACTGTACAACTTCACTGAAAATGGTCCTGACCCTTCCATCGACCCTACATTTCTTCCCACACTACGGGCACAGTGCCCCCAAAATACAGGTGCTCAAAACCGTGTAGCATTGGATACAGGCAGTGAATTCGAATTTGATAGATCTTACTTTAAAAATTTGAAGAATGGACGTGGAATTTTGCAGTCTGATCAATTGCTTTGGACTGATGCTTCCACAAAGACATTTGTGGAAGCGTACTCCGACTCAGCCTTACGTTTCAAATCGGACTTTGCAAAGTCTGTGGTGAAGATGGGCAACATTGAGCTCAAAACGGGTTCTGATAGTGAAATTCGCACCATATGTTCTGCCATTAACTAG 1050 0.4514 MYSTHSPTFPKKLIVTFHFGSLHFVTKMEGRSLNSLMFTLLGLTIVNTVGVSGQETSVGFYSRTCPRAESIVKSTVRDHLKSDPSLAAGLLRLHFHDCFVQGCDASVLIEGPQTERTALPNLSLKGFEVINDAKTQLEAVCPGVVSCADILALATRDSVDLSDGLSWKVPTGRRDGRISQASEANNLPSPFDSVAILTQKFAAKGLNTQDLVVLSGGHTIGTTACLFFRHRLYNFTENGPDPSIDPTFLPTLRAQCPQNTGAQNRVALDTGSEFEFDRSYFKNLKNGRGILQSDQLLWTDASTKTFVEAYSDSALRFKSDFAKSVVKMGNIELKTGSDSEIRTICSAIN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00375 349 FunFam Peroxidase 59 200 - -
Vimu2g00375 349 PRINTS Plant peroxidase signature 267 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g00375 349 PRINTS Plant peroxidase signature 144 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g00375 349 PRINTS Plant peroxidase signature 209 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g00375 349 PRINTS Plant peroxidase signature 65 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g00375 349 PRINTS Plant peroxidase signature 323 336 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g00375 349 PRINTS Plant peroxidase signature 89 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g00375 349 PRINTS Plant peroxidase signature 163 178 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g00375 349 PRINTS Plant peroxidase signature 283 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g00375 349 PRINTS Plant peroxidase signature 125 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g00375 349 CDD secretory_peroxidase 57 348 IPR033905 GO:0004601|GO:0042744
Vimu2g00375 349 ProSitePatterns Peroxidases proximal heme-ligand signature. 210 220 IPR019793 -
Vimu2g00375 349 PRINTS Haem peroxidase superfamily signature 163 175 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g00375 349 PRINTS Haem peroxidase superfamily signature 145 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g00375 349 PRINTS Haem peroxidase superfamily signature 210 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g00375 349 PRINTS Haem peroxidase superfamily signature 269 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g00375 349 PRINTS Haem peroxidase superfamily signature 87 101 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g00375 349 PANTHER PEROXIDASE 25-RELATED 41 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu2g00375 349 Gene3D - 59 349 - -
Vimu2g00375 349 Pfam Peroxidase 72 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu2g00375 349 Gene3D Peroxidase, domain 2 188 328 - -
Vimu2g00375 349 ProSitePatterns Peroxidases active site signature. 87 98 IPR019794 GO:0004601
Vimu2g00375 349 FunFam Peroxidase 188 328 - -
Vimu2g00375 349 SUPERFAMILY Heme-dependent peroxidases 57 349 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu2g00375 349 ProSiteProfiles Plant heme peroxidase family profile. 55 349 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00375 Vimu-Chr2 2120793 2122247 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00375 40 349 Peroxidase AT2G41480 59.494 6.63e-137 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00375 K00430 - gmx:100783523 461.07