Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00366 ATGGATCACCAAGCTGACACTAACAGAACTGATTTGATGACTATCACACGCTTTGTTCTGAACGAACAGTCGAAGTATCCTGAATCACGTGGCGACTTCACCATCCTTCTCAATGCCATTGTTCTTGGTTGCAAATTTGTTTGTTCTGCTGTTAGCAAGGCTGGGTTGGCTAAACTCATAGGACTTGCTGGAGAGATCAACGTTCAAGGGGAGGAGCAAAAGAAATTGGATGTACTTTCAAATGAAGTATTTGTGAAAGCCTTAATTAGCAGTGGACGCACATCCGTTCTTGTTTCTGAAGAAGTTGGAGAGGCCATATTTGTGCCACAATCACACCGTGGCAAATACATTGTTGTGTTTGATCCTTTGGATGGATCCTCAAACATTGACTGCGGAGTTTCTATTGGAACTATCTTTGGAATTTACATGGTAAAGAATGAGGCTAAAGTAAGTCTTGAAGATGCAATGCAACCTGGAAACCAAATGCTAGCAGCAGGTTACTGCATGTATGGAAGCTCTTGCACGTTCGTGCTTAGCACAGGAAATGGAGTGAATGGTTTTACACTCGATCCTTCCCTTGGGGAGTTCATATTAACTCACCCCAACATCAAGATACCAAGGAAAGGAAAGATTTATTCCGTGAATGAAGGAAATGCCAAAAACTGGGATGAACCAACCACTAAATATGTACAAAAGTGCAAGTTTCCTCAAGATGGTTCACCACCAAAGTCTCTTAGTATGGTTGCTGACATCCATCGAACATTGCTTTATGGTGGTATCTTCATGTACCCTGCTGATATAAAGAGTCCACATGGAAAGCTACGGATTCTGTATGAAGTATTTCCAATGTCATATTTGATGGAGCAAGCAGGAGGTCAGGCTTTCACAGGAAAACAACGGGCTCTTGACTTGGTTCCAAGAGAATTACATGAACGATCACCGATATTTCTTGGCAGTTACGATGACATCGAGCAAATCAAAGAGCTTTATGCATCATCCAAAGCAGACTGTGCATGA 1017 0.4208 MDHQADTNRTDLMTITRFVLNEQSKYPESRGDFTILLNAIVLGCKFVCSAVSKAGLAKLIGLAGEINVQGEEQKKLDVLSNEVFVKALISSGRTSVLVSEEVGEAIFVPQSHRGKYIVVFDPLDGSSNIDCGVSIGTIFGIYMVKNEAKVSLEDAMQPGNQMLAAGYCMYGSSCTFVLSTGNGVNGFTLDPSLGEFILTHPNIKIPRKGKIYSVNEGNAKNWDEPTTKYVQKCKFPQDGSPPKSLSMVADIHRTLLYGGIFMYPADIKSPHGKLRILYEVFPMSYLMEQAGGQAFTGKQRALDLVPRELHERSPIFLGSYDDIEQIKELYASSKADCA 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00366 338 ProSitePatterns Fructose-1-6-bisphosphatase active site. 272 284 IPR020548 GO:0005975|GO:0042578
Vimu2g00366 338 PIRSF FBPtase_SBPase 9 335 IPR000146 GO:0005975|GO:0016791
Vimu2g00366 338 PIRSF FBPtase 9 335 IPR028343 GO:0042132
Vimu2g00366 338 CDD FBPase 20 330 IPR000146 GO:0005975|GO:0016791
Vimu2g00366 338 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Vimu2g00366 338 PRINTS Fructose-1,6-bisphosphatase signature 306 331 IPR028343 GO:0042132
Vimu2g00366 338 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Vimu2g00366 338 PRINTS Fructose-1,6-bisphosphatase signature 186 209 IPR028343 GO:0042132
Vimu2g00366 338 PRINTS Fructose-1,6-bisphosphatase signature 155 178 IPR028343 GO:0042132
Vimu2g00366 338 PRINTS Fructose-1,6-bisphosphatase signature 212 239 IPR028343 GO:0042132
Vimu2g00366 338 SUPERFAMILY Carbohydrate phosphatase 8 330 - -
Vimu2g00366 338 FunFam Fructose-1,6-bisphosphatase class 1 204 334 - -
Vimu2g00366 338 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 201 IPR033391 -
Vimu2g00366 338 Gene3D - 4 203 - -
Vimu2g00366 338 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 3 331 IPR000146 GO:0005975|GO:0016791
Vimu2g00366 338 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 205 330 IPR044015 -
Vimu2g00366 338 FunFam Fructose-1,6-bisphosphatase, cytosolic 4 203 - -
Vimu2g00366 338 Gene3D - 204 337 - -
Vimu2g00366 338 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 332 IPR000146 GO:0005975|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00366 Vimu-Chr2 2063369 2066263 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Vimu2g00366 FBPase 2e-78 CL0171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00366 K03841 - gmx:100797157 627.861