Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00361 ATGGTCATGGATGTTCACCAATACCACCCTTTCTCTGTTTACTTCATTGCTTCCATTCTCTTTGTTTTCTTCATCTTATACAAATTAGTTAAAAGCTGGAGTTCAAACAACTCCTGTACCAATTTACCTCCAGGACCTACGACACTGCCTCTCATAGGAAACTTGCATCAGTTGGTAGGTTCATTGCCACATTACTCCTTAAAACTTTTGGCAGATAAGTACGGACCGTTAATGCACTTGAAACTAGGAGAGGTATCCAACGTCATAGTCACTTCACCGGAGATAGCCCAAGAGATTCTGAAAACACATGATGTTAATTTCTGTGATAGGCCAAACCTTGCGTCGGCTAGAACAATTTCTTACAACAATACCAGTATAGTCTTCTCTCCATATGGAGAATATTGGAGACTAGTACGAAAGATATGCACAGTGGAGCTACTAACATCAAAGCGAGTGCAATCTTTTCAGTCCATAAGGGAAGAGGAGGTGGCAGAACTCGTTAAGAAAATAGCTGCAAGTGAAGGCTGTGTTGTTAATCTCACCCAGAACATTTTCCCGATGACTTACGGAATAGCCGCACGAGCGGCTTTTGGTAAGAGAGGAAGATATCAACAAATTTTCATTTCAAAGATTGAGGAGCAATTGAAGCTCATGGGAGGGTTTTCGCTAGCTGATCTCTACCCTTCTAGCAGAGTGCTTGAAATGGTGGAGAAGGTGAAGTTTGAGAAAATTCACAAAGAGATTGACAGGGTTTTGGAAGACATCATCGAGGAACACAGAAATAGAAGCAAGTGTGAAGAAGTGGAAGATCTGGTCGATGTTCTTCTCAAGTATCAACAGGAAAACGATTCTGAAAGTGTCTTAACTGATGACAACATTAAAGCGGTCATCCAGGACATATTCGTCGGTGGAGGAGAGACTTCATCTTCCACAGTGGAATGGGCGATGTCAGAATTGATAAGAAACCCAAGGGTGATGGAAAAAGTACAAGCTGAGGTGAGAAAAGTGTATGATAGGAAGGGATATGTGGATGAGACAGAATTACAGAAACTGATATACTTGAAGTCCATAATCAAAGAAACATTGAGGTTACACCCACCTGTACCATTGTTAGTTCCGAGAGAAAGTAGAGAAAGGTGTGAAATCAATGGATATGAGATACCCTCTAAGACAAGGGTTATTATCAACGCTTGGGCAATTGGAAGAAATGCTGAGTGTTGGACTGAAGCTGAGAGTTTCAAACCTGAAAGATTTCTTAATAACGGTATCGATTTCAAAGGTGCAGACTTTGCATTTATCCCATTTGGTGGTGGAAGAAGGATCTGCCCAGGCATTACATTTGCCATCCCGAACATTGAGTTGCCACTTGCTCAGTTACTTTACCATTTTGATTGGAAGCTTCCCAACAATTTGAAGAATGATGAACTTGACATGACCGAGTCGGGTGGAATCACTCTCAGAAGAAAAAATGACCTCTGCTTGATTCCCATCCCTCGTCAAACTTAA 1506 0.4143 MVMDVHQYHPFSVYFIASILFVFFILYKLVKSWSSNNSCTNLPPGPTTLPLIGNLHQLVGSLPHYSLKLLADKYGPLMHLKLGEVSNVIVTSPEIAQEILKTHDVNFCDRPNLASARTISYNNTSIVFSPYGEYWRLVRKICTVELLTSKRVQSFQSIREEEVAELVKKIAASEGCVVNLTQNIFPMTYGIAARAAFGKRGRYQQIFISKIEEQLKLMGGFSLADLYPSSRVLEMVEKVKFEKIHKEIDRVLEDIIEEHRNRSKCEEVEDLVDVLLKYQQENDSESVLTDDNIKAVIQDIFVGGGETSSSTVEWAMSELIRNPRVMEKVQAEVRKVYDRKGYVDETELQKLIYLKSIIKETLRLHPPVPLLVPRESRERCEINGYEIPSKTRVIINAWAIGRNAECWTEAESFKPERFLNNGIDFKGADFAFIPFGGGRRICPGITFAIPNIELPLAQLLYHFDWKLPNNLKNDELDMTESGGITLRRKNDLCLIPIPRQT 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00361 501 Gene3D Cytochrome P450 36 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00361 501 PANTHER CYTOCHROME P450 71B11-RELATED 26 498 - -
Vimu2g00361 501 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00361 501 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00361 501 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00361 501 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00361 501 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00361 501 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00361 501 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00361 501 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00361 501 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00361 501 Pfam Cytochrome P450 43 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00361 501 CDD CYP71-like 73 492 - -
Vimu2g00361 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Vimu2g00361 501 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00361 501 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00361 501 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00361 501 FunFam Cytochrome P450 71D8 35 496 - -
Vimu2g00361 501 SUPERFAMILY Cytochrome P450 43 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00361 Vimu-Chr2 2043259 2044964 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00361 15 496 Cytochrome P450 AT3G26300 43.200 4.72e-141 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00361 - - gmx:606548 747.658