Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00359 ATGCACCTGAAACTAGGAGAGGTATCCAACGTCATAGTCACTTCACCGGAGATAGCCCAAGAGGTTCTGAAAACACATGATGTTAATTTCTCTGATAGGCCAAACCTTGCGTCGGCTAGAACAGTTACTTACAACAATACCAACATAGTCTTCTCTCCATATGGAGAATATTGGAGACAAGTACGAAAGATATGCACAATGGAGATACTGACGATAAAGCGAGTGCAATCTTTTCAGTCCATAAGGGAAGAGGAGGTGGCAGAACTGGTTAAGAAAATAGCTGCAAGTGAAGGCTGTGCTGTTAATCTCACCCAGAACATTTACCCGATGACTTGCGGAATAGTCGCACGAGCGACTTGTGGTAAAAAACGCAGACATCAACAAGTGTTCATTTCAAAGATTGATAAGCAATTGAAACTCATGGGAGGGTTTTCGCTAGCTGATCTCTATCCTTCTAGCAGAGTGCTTGAAATGGTGGAGAAGGTGAAGTTTGAGAAAATTCACAAAGAGACTGACAGAGTTTTGCAAGACATCATCGATGAACACAGAAATAGAAGCAAGTGTGAAGTAGTGGAAGATCTGGTCGATGTTCTTCTCAAGTATCAACAGGAAAACGATTCTGAAAGTCTCTTAACTGATGACAACATTAAAGCGGTAATCAAGGACATATTTGTCGCTGGAGGCACTTCATCTTCCGTAGTTGAATGGGGAATGTCAGAATTGATAAGAAACCCAAGGGTGATGGGAAAAGCACAAGCTGAGGTGAGAAGAGTGTATGGTAAGAAGGGATATGTGGATGAGACAGAATTACAGAAACTGATATACTTGAAGTCCATAATCAAAGAAACAATGAGGTTACACCCACCTGTACCATTGTTGGTTCCGAGAGAAAGTAGAGAAAGGTGTGAAATCAATGGATATGAGATACCCTCTAAGACAAGGGTAATTATCAACGCTTGGGCAATTGGAAGAAATGCTGAGTATTGGACTGAAGCTGAGAGTTTCAAACCTGAAAGGTTTCTTAATAACGATATCGATTTCAAAGGTGCAGACTTTGAATTTATCCCATTTGGTGGCGGAAGAAGGATCTGTCCAGGCATTACATTTGCCATCGCAAACATTGAGTTGCCACTTGCTCAGTTACTTTACCATTTTGATTGGAAGCTTCCCAACAATATGAAGAATGAAGAACTTGATATGACCGAGTCGGGAGGAATTACTATCAGAAGAAAACATGACCTCTGTTTGATCCCTATCACTCATCAAACTTAA 1272 0.4104 MHLKLGEVSNVIVTSPEIAQEVLKTHDVNFSDRPNLASARTVTYNNTNIVFSPYGEYWRQVRKICTMEILTIKRVQSFQSIREEEVAELVKKIAASEGCAVNLTQNIYPMTCGIVARATCGKKRRHQQVFISKIDKQLKLMGGFSLADLYPSSRVLEMVEKVKFEKIHKETDRVLQDIIDEHRNRSKCEVVEDLVDVLLKYQQENDSESLLTDDNIKAVIKDIFVAGGTSSSVVEWGMSELIRNPRVMGKAQAEVRRVYGKKGYVDETELQKLIYLKSIIKETMRLHPPVPLLVPRESRERCEINGYEIPSKTRVIINAWAIGRNAEYWTEAESFKPERFLNNDIDFKGADFEFIPFGGGRRICPGITFAIANIELPLAQLLYHFDWKLPNNMKNEELDMTESGGITIRRKHDLCLIPITHQT 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00359 423 Pfam Cytochrome P450 2 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00359 423 PRINTS P450 superfamily signature 225 242 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00359 423 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00359 423 PRINTS P450 superfamily signature 278 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00359 423 PRINTS P450 superfamily signature 355 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00359 423 CDD CYP71-like 1 414 - -
Vimu2g00359 423 FunFam Cytochrome P450 99A2 1 419 - -
Vimu2g00359 423 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 357 366 IPR017972 GO:0005506|GO:0016705
Vimu2g00359 423 PANTHER OS08G0105600 PROTEIN 1 422 - -
Vimu2g00359 423 SUPERFAMILY Cytochrome P450 2 417 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00359 423 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00359 423 PRINTS E-class P450 group I signature 318 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00359 423 PRINTS E-class P450 group I signature 215 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00359 423 PRINTS E-class P450 group I signature 277 295 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00359 423 PRINTS E-class P450 group I signature 234 260 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00359 423 PRINTS E-class P450 group I signature 364 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00359 423 PRINTS E-class P450 group I signature 354 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu2g00359 423 Gene3D Cytochrome P450 1 420 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00359 Vimu-Chr2 2036927 2038396 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00359 1 418 Cytochrome P450 AT3G26330 41.163 6.67e-119 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00359 - - var:108342947 744.577