Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00356 ATGGAGAAGTTGAACGTGGTGCATGCATTGAAGCCAGTTCTGCTAATGGTGTTGGTGCAGGTTACAAATGCTTGGGTCAATGTTCTCTACAAGCTCGCCCTTAACGATGGCATGAACTTGAGTATCATCGTTGCTTACCGCTATGTTTTCGCCACTGCTTTCATTGCTCCACTAGCTTTTCTTATTGAAAGGTTCTTCCTTCTTCCCTTCTTATTAATCTTTCATTTTCTAATCAAAACCCACTTAGGATGCATAGATATGAGCCAAGAAAATGATTTGTGGGAAGACGAGGACGAAGATGACTTGGACGATACTTTTTCAGGCATTCGTATGTGGCTTAATTGGAATGCTTGTGATGAATTTATACGCAGTGGAGCTTTGCCTCAAAACTTAAACATGGAAGCAATCGCTTTAACATCAGTAACGTTCACTACTGCCATATCCAATCTCATCCCAGCCCTCACTTTCATCATATCCCTTTCCTTCGGATTGGAGAGATTGAATTTAAAAACAGCAGGAGGGAAGGCGAAGATAATTGGAACAATAACTGGAATTAGTGGAGCAATGATTCTAACTTTCTTGAAAGGCCCAGAAGTTCAGATGCTTTCGTTCCACATAAATCTTTTCAACCATCAAAACGGCAATGTCGTACATCCACACGCTACTTCTGGCGTTATGACCATATTCGGTGCACTCGCGTCTGTCGCAAGCAACGTCTCTTATGCACTATGGCTTATCATTCAGGCAAAAATGAGTGAAAGATACCCTTGTCCTTATTCAAGCACAGCGTTAATGTCCCTAATGGGGGCACTGTTATCCGTTTCTTATGCATTTTGTGTTGAAAGGGATTTGAGTGAGTGGAGATTGGGCTGGAATATCAGACTGTTGACTGTAGCTTATGCGGGTATAGTGGTTTCTGGAGTGATGGTGGCTGTGATTTCGTGGTGTGTACGCGCGAGAGGTCCATTGTTTGTCTCTATTTTCAGCCCTCTTATGCTTGTGGTTGTGGCCTTTGCTGGATCCACTATTTTGGACGAGAAGCTATATCTTGGGAGCATAATTGGATCAGTGATGATTATTTGCGGATTATACGTGGTTCTATGGGGTAAAAGCAAAGAGATGAAGAAGAATCAATCGGTTCCATCTGAAAACGCCCATAAATTAGACACAGTTGAAATAATGGTCAAACCTCGAGCAGGAGAAAAGAGCAACAATAGCAATAGCCTGGTGAATGCAGTAAATGCGGTTGGGGAAAATGGAGAGAAATAG 1269 0.424 MEKLNVVHALKPVLLMVLVQVTNAWVNVLYKLALNDGMNLSIIVAYRYVFATAFIAPLAFLIERFFLLPFLLIFHFLIKTHLGCIDMSQENDLWEDEDEDDLDDTFSGIRMWLNWNACDEFIRSGALPQNLNMEAIALTSVTFTTAISNLIPALTFIISLSFGLERLNLKTAGGKAKIIGTITGISGAMILTFLKGPEVQMLSFHINLFNHQNGNVVHPHATSGVMTIFGALASVASNVSYALWLIIQAKMSERYPCPYSSTALMSLMGALLSVSYAFCVERDLSEWRLGWNIRLLTVAYAGIVVSGVMVAVISWCVRARGPLFVSIFSPLMLVVVAFAGSTILDEKLYLGSIIGSVMIICGLYVVLWGKSKEMKKNQSVPSENAHKLDTVEIMVKPRAGEKSNNSNSLVNAVNAVGENGEK 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00356 422 Pfam EamA-like transporter family 229 367 IPR000620 GO:0016020
Vimu2g00356 422 PANTHER WAT1-RELATED PROTEIN 11 378 IPR030184 GO:0016020|GO:0022857
Vimu2g00356 422 SUPERFAMILY Multidrug resistance efflux transporter EmrE 289 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00356 Vimu-Chr2 2012284 2015390 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00356 10 395 Nodulin-like Gene Family AT1G68170 39.119 5.29e-89 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00356 - - gmx:100788378 579.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00356 2 2012284 2015390 Vimu2g00356 2 2012284 2015390 ECH