Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00354 ATGAGAGATATAGGGAAAGTAATGCATGGGTTGAAACCAGCCCTGCTGATGTTGATGGTGCAGATTGCATTTGCTTCCGTGAACGTGCTCTACAAACTTGCCATAAATGATGGAATGAGCGTGAGAATAATCACTGCCTACCGTCTCATTTTCGCTGCAGCTTCTACGGAAAAACATACGAACGCTGACTTGGAGGGTGATTTTAAAGTCATTTTTCTGTGGATTATTCGGTCCTTGAAACTGATTTCAGCAACATTTGCTTCTGCTGTTTTTAATCTCATTCCTGCCGTCACTTTTATCTTGGCCGTCACTTGCGGGGCAGCTGGTAAGGCTAAGGTGTTGGGAACGATAACAGGAGTTGGCGGGGCAATGATGCTGACCTTTCTCAAAGGTGTAGAAATCAACATCTGGACCTCCCACATTAACCTTTTGCATGAAAAGGGTACCACGGAAACGCTAAATGGTGACTCTGGAAGTAAATTGCTAGGAGTTTTTTGTGGTCTTGGAAGCTGTTTATGTTTTGCATTATGGCTCATTATTCAGGCTCAGATGAGTAAAGAGTTCCCAGGCCATCACTCAAGTACAGCTTTGATGTCAACAATGGGGGCAATTCAAGCCACTGTTTTTGCCCTGTGTATTGAGAAGGATTGGAGCCAATGGAGGTTGGGCTGGAACATTAGGCTTCTAGCTTCAGCATATTCGGGAATTGTGGCTTCTGGAATAATGGTTGTTGTGATAGCATGGTGTGTAAGGATGAGGGGTCCATTGTTTGCATCTGTTTTCAATCCTCTACTGCTAGTGCTTGTGGCCGTTGCTGGTTCCTTGATGTTGGATGAGAAGCTATACGTAGGAAGTGTGATGGGAGCAGTGCTAATTGTGATGGGATTGTACATGGTGCTGTGGGGTAAGAGCAAGGAAATGAAAAGAGTGAGTGACTTAGAAACTACTCCAGAAATAGAAGAAATTGAGGTTGTTGTGAGGTGTAGGGCAACAGAGGATGATAAAAGCAACGACAAGTACACCTGTAGTGAAAGGAACATTATTGAGAAGGATAATGATAATGCATCAAAAAGCAGAGATGAAGGACAAGACAACGAAAGTAGTGGGAAAGAAGATATGGGTAGCTCTGGGGAAGCCTTGAAGACCTAA 1149 0.4386 MRDIGKVMHGLKPALLMLMVQIAFASVNVLYKLAINDGMSVRIITAYRLIFAAASTEKHTNADLEGDFKVIFLWIIRSLKLISATFASAVFNLIPAVTFILAVTCGAAGKAKVLGTITGVGGAMMLTFLKGVEINIWTSHINLLHEKGTTETLNGDSGSKLLGVFCGLGSCLCFALWLIIQAQMSKEFPGHHSSTALMSTMGAIQATVFALCIEKDWSQWRLGWNIRLLASAYSGIVASGIMVVVIAWCVRMRGPLFASVFNPLLLVLVAVAGSLMLDEKLYVGSVMGAVLIVMGLYMVLWGKSKEMKRVSDLETTPEIEEIEVVVRCRATEDDKSNDKYTCSERNIIEKDNDNASKSRDEGQDNESSGKEDMGSSGEALKT 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00354 382 MobiDBLite consensus disorder prediction 332 368 - -
Vimu2g00354 382 PANTHER WAT1-RELATED PROTEIN 12 314 IPR030184 GO:0016020|GO:0022857
Vimu2g00354 382 MobiDBLite consensus disorder prediction 332 382 - -
Vimu2g00354 382 Pfam EamA-like transporter family 162 300 IPR000620 GO:0016020
Vimu2g00354 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00354 Vimu-Chr2 2001533 2003494 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00354 1 343 Nodulin-like Gene Family AT1G68170 38.108 1.95e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00354 - - gmx:100809587 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00354 2 2001533 2003494 Vimu2g00354 2 2001533 2003494 ECH
Vimu2g00354 2 2001533 2003494 Vimu11g01354 11 15077771 15078184 PCT