Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00333 ATGTTGGTGCTTTGCTCTGACATGGCTCATGCAACCAATTATGTGGTCGGAGGTAGAGATGGTTGGAGTACAAACGCTTCTTCGTGGAGTGGAAAGGTTTTCAAGACCGGTGATAAATTATTATTTGTCTACGATGCTACAAAACACAATGTGGTGGTAGTAGACCAAGGAGGATACAATTCATGCAGTGCTCCAGCAGGATCAAAAACTTATCAGACAGGACATGATTATATTCAGCTACTCAAAGGATTAAGCTACTTCATTTCCTCTTTTCCTGGTGACTGTCAGGCTGGGACGAAATTTTCATGTACTGCTCTATGA 321 0.4206 MLVLCSDMAHATNYVVGGRDGWSTNASSWSGKVFKTGDKLLFVYDATKHNVVVVDQGGYNSCSAPAGSKTYQTGHDYIQLLKGLSYFISSFPGDCQAGTKFSCTAL 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00333 106 SUPERFAMILY Cupredoxins 13 103 IPR008972 -
Vimu2g00333 106 ProSiteProfiles Phytocyanin domain profile. 12 106 IPR003245 GO:0009055
Vimu2g00333 106 Pfam Plastocyanin-like domain 25 98 IPR003245 GO:0009055
Vimu2g00333 106 CDD Plantacyanin 12 105 IPR041844 -
Vimu2g00333 106 Gene3D - 12 105 IPR008972 -
Vimu2g00333 106 PANTHER BLUE COPPER PROTEIN 10 102 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00333 Vimu-Chr2 1865529 1865937 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00333 1 106 Phytocyanin Superfamily AT1G17800 41.880 6.24e-23 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00333 - - ini:109167127 118.627