Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu2g00329 ATGGTTCAGGGAAGAGGTATCAGTGCAACAATGGTTGTGTTGTGCATGTTGGGAGTTTTCTCTGAGATGGCTCATGCAACAACGTACGTGGTCGGAGGTAGCATTGGTGGTTGGGCCTTCAACATGACTGGTTGGCCTACCGGAAAGAATTTTAAGACTGGTGATATACTAGTGGACGAAGCTGGATACAATTCGTGTACTGCTGCTCCAGGAGCAAAAACGTATCAGTCAGGACATGATAGCATTACTCTTGCCAAAGGAACGACCTACTTCATCTGCACTTTTTTTTGGTCACTGCGAGGCTAA 306 0.4641 MVQGRGISATMVVLCMLGVFSEMAHATTYVVGGSIGGWAFNMTGWPTGKNFKTGDILVDEAGYNSCTAAPGAKTYQSGHDSITLAKGTTYFICTFFWSLRG 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu2g00329 101 ProSiteProfiles Phytocyanin domain profile. 27 101 IPR003245 GO:0009055
Vimu2g00329 101 SUPERFAMILY Cupredoxins 28 95 IPR008972 -
Vimu2g00329 101 Gene3D - 25 96 IPR008972 -
Vimu2g00329 101 Pfam Plastocyanin-like domain 58 95 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu2g00329 Vimu-Chr2 1823210 1823640 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu2g00329 7 95 Phytocyanin Superfamily AT1G17800 37.736 2.68e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu2g00329 - - jre:109007045 108.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu2g00329 2 1823210 1823640 Vimu2g00329 2 1823210 1823640 ECH